Vol 12 (2013)

Original articles

• Bagheri N, Rahimian G, Salimzadeh L, Azadegan F, Rafieian-Kopaei M , Taghikhani A, Shirzad H
  Association of the virulence factors of Helicobacter pylori and gastric mucosal interleukin-17/23 mRNA expression in dyspeptic patients
  EXCLI Journal 2013;12:5-14
  
  
• Idrees M, Adnan A, Sheikh S, Qureshi FA
  Optimization of dilute acid pretreatment of water hyacinth biomass for enzymatic hydrolysis and ethanol production
  EXCLI Journal 2013;12:30-40
  
  
• Kashefi AH, Meshkin A, Zargoosh M, Zahiri J, Taheri M, Ashtiani S
  Scatter-search with support vector machine for prediction of relative solvent accessibility
  EXCLI Journal 2013;12:52-63
  
  
• Hamidi M, Zamanzad B, Mesripour A
  Comparing the effect of clofibrate and phenobarbital on the newborns with hyperbilirubinemia
  EXCLI Journal 2013;12:75-78
  
  
• Sasirekha B
  Prevalence of ESBL, AmpC ß-lactamases and MRSA among uropathogens and its antibiogram
  EXCLI Journal 2013;12:81-88
  
  
• Li H, Li X, Zhang D, Liu H, Guan K
  Effects of drought stress on the seed germination and early seedling growth of the endemic desert plant Eremosparton songoricum (Fabaceae)
  EXCLI Journal 2013;12:89-101
  
  
• Kaewthawee N, Brimson S
  The effects of ursolic acid on cytokine production via the MAPK pathways in leukemic T-cells
  EXCLI Journal 2013;12:102-114
  
  
• Joukar S, Najafipour H, Mirzaeipour F, Nasri H, Ahmadi MYH, Badinloo M
  Modulatory effect of semelil (ANGIPARS™) on isoproterenol induced cardiac injury
  EXCLI Journal 2013;12:122-129
  
  
• Mirzaie S, Monajjemi M, Hakhamaneshi MS, Fathi F, Jamalan M
  Combined 3D-QSAR modeling and molecular docking study on multi-acting quinazoline derivatives as HER2 kinase inhibitors
  EXCLI Journal 2013;12:130-143
  
  
• Cader RA, Mohd R, Gafor HA, Kong NCT
  Post transplant lymphoproliferative disorder: a case series and review of literature
  EXCLI Journal 2013;12:144-149
  
  
• Karakoca K, Asan Ozusaglam M, Cakmak YS, Karaman Erkul S
  Antioxidative, antimicrobial and cytotoxic properties of Isatis floribunda Boiss. ex Bornm. extracts
  EXCLI Journal 2013;12:150-167 
  
  
• Mirzaie S, Chupani L, Asadabadi EB, Shahverdi AR, Jamalan M
  Novel inhibitor discovery against aromatase through virtual screening and molecular dynamic simulation: a computational approach in drug design
  EXCLI Journal 2013;12:168-183
  
  
• Eftekhari P, Hajizadeh S, Raoufy MR, Masjedi MR, Yang M, Hansbro N, Li JJ, Foster PS
  Preventive effect of N-acetylcysteine in a mouse model of steroid resistant acute exacerbation of asthma
  EXCLI Journal 2013;12:184-192
  
  
• Abdel-Salam OME, Salem NA, El-Shamarka MES, Ahmed NAS, Hussein JS, El-Khyat ZA
  Cannabis-induced impairment of learning and memory: effect of different nootropic drugs
  EXCLI Journal 2013;12:193-214
  
  
• Gupta CL, Akhtar S, Bajpai P, Kandpal KN, Desai GS, Tiwari AK
  Computational modeling and validation studies of 3-D structure of neuraminidase protein of H1N1 influenza A virus and subsequent in silico elucidation of piceid analogues as its potent inhibitors
  EXCLI Journal 2013;12:215-225
  supplementary material
  
  
• Okwa IB, Akindele AJ, Agbaje EO, Oshinuga OT, Anunobi CC, Adeyemi OO
  Effect of subclinical, clinical and supraclinical doses of calcium channel blockers on models of drug-induced
  hepatotoxicity in rats
  EXCLI Journal 2013;12:231-250
  
  
• Ghanbarabadi JK, Sayyah M
  Blocking of rat hippocampal Cx36 by quinine accelerates kindling epileptogenesis
  EXCLI Journal 2013;12:251-259
  
  
• Jakovljević ZD, Stanković SM, Topuzović DM
  Seasonal variability of Chelidonium majus L. secondary metabolites content and antioxidant activity
  EXCLI Journal 2013;12:260-268
  
  
• Idrees M, Adnan A, Malik F, Qureshi FA
  Enzymatic saccharification and lactic acid production from banana pseudo-stem through optimized pretreatment at lowest catalyst concentration
  EXCLI Journal 2013;12:269-281
  
  
• Moghadam FH, Vakili-Zarch B, Shafiee M, Mirjalili A
  Fenugreek seed extract treats peripheral neuropathy in pyridoxine induced neuropathic mice
  EXCLI Journal 2013;12:282-290
  
  
• Patel D, Desai S, Gajaria T, Devkar R, Ramachandran AV
  Coriandrum sativum L. seed extract mitigates lipotoxicity in RAW 264.7 cells and prevents atherogenic changes in rats
  EXCLI Journal 2013;12:313-334
  
  
• Torabi-Nami M, Nasehi M, Zarrindast M-R
  Sleep loss and the brain vulnerability to neurodegeneration: behavioral, biochemical and neurohistopathological observations in a rat model
  EXCLI Journal 2013;12:347-372
  
  
• Sailaja KV, Shivaranjani VL, Poornima H, Rahamathulla SB, Lakshmi Devi K
  Protective effect of Tribulus terrestris L. fruit aqueous extract on lipid profile and oxidative stress in isoproterenol induced myocardial necrosis in male albino Wistar rats
  EXCLI Journal 2013;12:373-383
  
  
• Hashemi S, Nasrollah A, Rajabi M
  Irrational antibiotic prescribing: a local issue or global concern?
  EXCLI Journal 2013;12:384-395 
  
  
• Koç ZE, Aladag MO, Uysal A 
  Synthesis of novel dopamine derived multidirectional ligands from cyanuric chloride: structural and antimicrobial studies
  EXCLI Journal 2013;12:396-403
  
  
• Abed SA, Sirat HM, Taher M
  Total phenolic, antioxidant, antimicrobial activities and toxicity study of Gynotroches axillaris Blume (Rhizophoraceae)
  EXCLI Journal 2013;12:404-412
  
  
• Phichitchaisopa N, Naenna T
  Factors affecting the adoption of healthcare information technology
  EXCLI Journal 2013;12:413-436
  
  
• Senemar S, Saffari B, Sharifkazemi MB, Bahari M, Jooyan N, Dehaghani ED, Yavarian M
  5,10-methylene tetrahydrofolate reductase C677T gene polymorphism, homocysteine concentration and the extent of premature coronary artery disease in Southern Iran
  EXCLI Journal 2013;12:437-448
  
  
• Asle-Rousta M, Oryan S, Ahmadiani A, Rahnema M
  Activation of sphingosine 1-phosphate receptor-1 by SEW2871 improves cognitive function in Alzheimer's disease model rats
  EXCLI Journal 2013;12:449-461
  
  
• Naveen Kumar DR, George VC, Suresh PK, Kumar RA
  Acceleration of pro-caspase-3 maturation and cell migration inhibition in human breast cancer cells by phytoconstituents of Rheum emodi rhizome extracts
  EXCLI Journal 2013;12:462-478 
  
  
• Dai J, Zhu L, Yang L, Qiu J
  Chemical composition, antioxidant and antimicrobial activities of essential oil from Wedelia prostrata
  EXCLI Journal 2013;12:479-490 
  
  
• Caengprasath N, Ngamukote S, Mäkynen K, Adisakwattana S
  The protective effects of pomelo extract (Citrus grandis L. Osbeck) against fructose-mediated protein oxidation and glycation
  EXCLI Journal 2013;12:491-502
  
  
• Kaya M, Tozak KÖ, Baran T, Sezen G, Sargin I
  Natural porous and nano fiber chitin structure from Gammarus argaeus (Gammaridae crustacea)
  EXCLI Journal 2013;12:503-510 
  
  
• Rozita M, Noorul Afidza M, Ruslinda M, Cader R, Halim AG, Kong CTN, Nor Azmi K, Shah SA
  Serum vitamin D levels in patients with chronic kidney disease
  EXCLI Journal 2013;12:511-520
  
  
• Sedigh-Ardekani M, Saadat I, Saadat M
  Evaluation of chromosome abberations induced by digoxin in Chinese hamster ovary cells
  EXCLI Journal 2013;12:523-527
  
  
• Bai H, Wang H, Sun J, Irfan M, Han M, Huang Y, Han X, Yang Q
  Production, purification and characterization of novel beta glucosidase from newly isolated Penicillium simplicissimum H-11 in submerged fermentation
  EXCLI Journal 2013;12:528-540
  
  
• Ganjtabesh M, Zare-Mirakabad F, Nowzari-Dalini A
  Inverse RNA folding solution based on multi-objective genetic algorithm and Gibbs sampling method
  EXCLI Journal 2013;12:546-555 
  
  
• Ramesh B, Karuna R, Sreenivasa Reddy S, Sudhakara G, Saralakumari D
  Ethanolic extract of Commiphora mukul gum resin attenuates streptozotocin-induced alterations in carbohydrate and lipid metabolism in rats
  EXCLI Journal 2013;12:556-568
  
  
• Worachartcheewan A, Nantasenamat C, Isarankura-Na-Ayudhya C, Prachayasittikul V
  Quantitative population-health relationship (QPHR) for assessing metabolic syndrome
  EXCLI Journal 2013;12:569-583
  
  
• Wang J, Wang B, Li Y, Wang D, E Lingling, Bai Y, Liu H
  High glucose inhibits osteogenic differentiation through the BMP signaling pathway in bone mesenchymal stem cells in mice
  EXCLI Journal 2013;12:584-597
  
  
• Al-Ani B
  Resveratrol inhibits proteinase-activated receptor-2-induced release of soluble vascular endothelial growth factor receptor-1 from human endothelial cells
  EXCLI Journal 2013;12:598-604 
  
  
• Ahmed MM, Abdel-Salam OME, Mohammed NA, Habib DF, Gomaa HE
  Oxidative status and the response to pegylated-interferon alpha2A plus ribavirin in chronic genotype 4 HCV hepatitis
  EXCLI Journal 2013;12:605-615
  
  
• Naeini EH, Neyestanak MZ, Berjis K, Shokoohi M
  Association between individual ovarian dimensions with ovarian reserve indices
  EXCLI Journal 2013;12:616-624
  
  
• Kumar D, Sharma VK, Kumar R, Singh T, Singh H, Singh AD, Roy RK
  Design, synthesis and anticonvulsant activity of some new 5,7-dibromoisatin semicarbazone derivatives
  EXCLI Journal 2013;12:628-640
  
  
• Ikeda S, Harada K, Ohwatashi A, Kamikawa Y, Yoshida A
  Contralateral cortical role on functional recovery in a rat model of hemiplegia
  EXCLI Journal 2013;12:641-646 
  
  
• Mahmoud AM
  Hematological alterations in diabetic rats - role of adipocytokines and effect of citrus flavonoids
  EXCLI Journal 2013;12:647-657
  
  
• Tao Y, Zhang YM
  Plant traits with different dimensions of shrubs represent different spatial patterns and plant-to-plant interactions in a temperate desert
  EXCLI Journal 2013;12:658-669 
  
  
• Tozak KÖ, Erzengin M, Sargin I, Ünlü N
  Sorption of DNA by diatomite-Zn (II) embedded supermacroporous monolithic p(HEMA) cryogels
  EXCLI Journal 2013;12:670-680
  
  
• Hassan J, Cader RA, Kong NCT, Mohd M, Rahman AR, Hod R
  Coupled plasma filtration adsorption (CPFA) plus continuous veno-venous haemofiltration (CVVH) versus CVVH alone as an adjunctive therapy in the treatment of sepsis
  EXCLI Journal 2013;12:681-692
  
  
• Ohwatashi A, Ikeda S, Harada K, Kamikawa Y, Yoshida A
  Exercise enhanced functional recovery and expression of GDNF after photochemically induced cerebral infarction in the rat
  EXCLI Journal 2013;12:693-700
  
  
• Piacham T, Nantasenamat C, Isarankura-Na-Ayudhya C, Prachayasittikul V
  Synthesis and computational investigation of molecularly imprinted nanospheres for selective recognition of alpha-tocopherol succinate
  EXCLI Journal 2013;12:701-718 
  
  
• Ahmed MM, Elserougy EM, Al-Gazzar II, Fikry IM, Habib DF, Younes KM, Salem NA
  Anti-apolipoprotein A-I antibodies and paraoxonase 1 activity in systemic lupus erythematosus
  EXCLI Journal 2013;12:719-732
  
  
• Bølling AK, Holme JA, Bornehag CG, Nygaard UC, Bertelsen RJ, Nånberg E, Bodin J, Sakhi AK, Thomsen C, Becher R
  Pulmonary phthalate exposure and asthma - is PPAR a plausible mechanistic link?
  EXCLI Journal 2013;12:733-759
  supplementary material
  
  
• Inoue S, Shibata Y, Takabatake N, Igarashi A, Abe S, Kubota I
  Influence of corticosteroid therapy on the serum antibody response to influenza vaccine in elderly patients with chronic pulmonary diseases
  EXCLI Journal 2013;12:760-765
  
  
• Mansour HH
  Protective effect of ginseng against gamma-irradiation-induced oxidative stress and endothelial dysfunction in rats
  EXCLI Journal 2013;12:766-777
  
  
• Abdel Aziz MT, Atta HM, Samer H, Ahmed HH, Rashed LA, Sabry D, Abdel Raouf ER, ALKaffas MA
  Heme oxygenase effect on mesenchymal stem cells action on experimental Alzheimer's disease
  EXCLI Journal 2013;12:778-792
  
  
• Taki FA, Pan Y, Zhang B
  Nicotine exposure caused significant transgenerational heritable behavioral changes in Caenorhabditis elegans
  EXCLI Journal 2013;12:793-806
  
  
• Mihailović V, Matić S, Mišić D, Solujić S, Stanić S, Katanić J, Mladenović M, Stanković N
  Chemical composition, antioxidant and antigenotoxic activities of different fractions of Gentiana asclepiadea L. roots extract
  EXCLI Journal 2013;12:807-823
  
  
• Muhammad A, Sirat HM
  COX-2 inhibitors from stem bark of Bauhinia rufescens Lam. (Fabaceae)
  EXCLI Journal 2013;12:824-830
  
  
• Rizvi SMD, Shakil S, Haneef M
  A simple click by click protocol to perform docking: Autodock 4.2 made easy for non-bioinformaticians
  EXCLI Journal 2013;12:831-857
  
  
• Chaudhari HS, Bhandari U, Khanna G
  Embelia ribes extract reduces high fat diet and low dose streptozotocin-induced diabetic nephrotoxicity in rats
  EXCLI Journal 2013;12:858-871
  
  
• Bhat MA, Mahajan N, Gandhi G
  DNA and chromosomal damage in coronary artery disease patients
  EXCLI Journal 2013;12:872-884 
  
  
• Worachartcheewan A, Nantasenamat C, Prasertsrithong P, Amranan J, Monnor T, Chaisatit T, Nuchpramool W, Prachayasittikul V
  Machine learning approaches for discerning intercorrelation of hematological parameters and glucose level for identification of diabetes mellitus
  EXCLI Journal 2013;12:885-893
  supplementary material
  
  
• Oloyede GK, Oyelola MS 
  Chrysen-2-ol derivative from West Indian wood nettle Laportea aestuans (L.) Chew inhibits oxidation and microbial growth in vitro
  EXCLI Journal 2013;12:894-906 
  
  
• Azmin S, Sahathevan R, Rabani R, Nafisah WY, Tan HJ, Raymond AA, Hamidon BB, Shamsul AS, Norlinah MI
  Biochemical aspirin resistance in stroke patients - a cross-sectional single centre study
  EXCLI Journal 2013;12:907-915
  
  
• Shahouzehi B, Shokoohi M, Najafipour H
  The effect of opium addiction on serum adiponectin and leptin levels in male subjects: a case control study from Kerman Coronary Artery Disease Risk factors Study (KERCADRS)
  EXCLI Journal 2013;12:916-923
  supplementary material
  
  
• Nassif WMH, Amin AI, Hassan ZA, Abdelaziz DHA
  Changes of serum omentin-1 levels and relationship between omentin-1 and insulin resistance in chronic hepatitis C patients
  EXCLI Journal 2013;12:924-932
  
  
• Kim M-J, Yang K-W, Kim SS, Park SM, Park KJ, Kim KS, Choi YH, Cho KK, Lee NH, Hyun C-G
  Chemical composition and anti-inflammatory effects of essential oil from Hallabong flower
  EXCLI Journal 2013;12:933-942
  
  
• Abdel-Moneim A, Morsy BM, Mahmoud AM, Abo-Seif MA, Zanaty MI
  Beneficial therapeutic effects of Nigella sativa and/or Zingiber officinale in HCV patients in Egypt
  EXCLI Journal 2013;12:943-955
  supplementary material
  
  
• Zhang X, Liu Z, Bi X, Liu J, Li W, Zhao Y
  Flavonoids and its derivatives from Callistephus chinensis flowers and their inhibitory activities against alpha-glucosidase 
  EXCLI Journal 2013;12:956-966
  
  
• Grosch M, Fuchs J, Bösl M, Winterpacht A, Tagariello A
  Selenoprotein M is expressed during bone development
  EXCLI Journal 2013;12:967-979
  supplementary material
  
  
• Haghparast A, Fatahi Z, Zeighamy Alamdary S, Khodagholi F
  Changes in apoptotic factors in hypothalamus and hippocampus after acute and subchronic stress induction during conditioned place preference paradigm
  EXCLI Journal 2013;12:1001-1016
  
  
• Kumar A, Jain S, Parle M, Jain N, Kumar P
  3-Aryl-1-phenyl-1H-pyrazole derivatives as new multitarget directed ligands for the treatment of Alzheimer's disease, with acetylcholinesterase and monoamine oxidase inhibitory properties
  EXCLI Journal 2013;12:1030-1042

Review articles

• Khakpai F, Zarrindast MR, Nasehi M, Haeri-Rohani A, Eidi A
  The role of glutamatergic pathway between septum and hippocampus in the memory formation
  EXCLI Journal 2013;12:41-51
  
  
• Bolt HM
  Current developments in toxicological research on arsenic
  EXCLI Journal 2013;12:64-74
  
  
• Prachayasittikul V, Prachayasittikul S, Ruchirawat S, Prachayasittikul V
  High therapeutic potential of Spilanthes acmella: a review
  EXCLI Journal 2013;12:291-312
  
  
• Borkotoky S, Meena CK, Khan MW, Murali A
  Three dimensional electron microscopy and in silico tools for macromolecular structure determination
  EXCLI Journal 2013;12:335-346
  
  
• Chaitra KL, Ulaganathan K, James A, Ananthapur V, Nallari P
  miRNA regulation during cardiac development and remodeling in cardiomyopathy
  EXCLI Journal 2013;12:980-992
  
  
• Butt MS, Naz A, Sultan MT, Qayyum MMN
  Anti-oncogenic perspectives of spices/herbs: a comprehensive review
  EXCLI Journal 2013;12:1043-1065

Case reports

• Norasyikin AW, Rozita M, Suehazlyn Z, Nor Azmi K
  Adrenal involvement in histoplasmosis
  EXCLI Journal 2013;12:1-4
  
  
• Lu Y, Pei Y, Shao Y, Yan S, Ma L, Fang F, Jin M, Liu M, Li J, Li C
  Hepatotoxicity induced by zoledronic acid in an aged woman with primary osteoporosis
  EXCLI Journal 2013;12:115-117
  
  
• Hazmi M, Ab Aziz A, Asma A
  Familial pattern of large vestibular aqueduct syndrome in a Chinese family
  EXCLI Journal 2013;12:118-121
  
  
• Abdul Wahab A, Rahman MM
  Pseudomonas aeruginosa bacteremia secondary to acute right leg cellulitis: case of community-acquired infection
  EXCLI Journal 2013;997-1000

Editorial material

• Marashi S-A, Hosseini-Nami SMA, Alishah K, Hadi M, Karimi A, Hosseinian S, Ramezanifard R, Mirhassani RS, Hosseini Z, Shojaie Z
  Impact of Wikipedia on citation trends
  EXCLI Journal 2013;12:15-19 
  supplementary information
  
  
• Gong J, Zhang Y, Feng J, Huang Y, Wei Y, Zhang W
  Influence of framing on medical decision making
  EXCLI Journal 2013;12:20-29
  
  
• Bolt HM
  Relevance of genetic disposition versus environmental exposure for cancer risk: an old controversy revisited with novel methods
  EXCLI Journal 2013;12:79-80
  
  
• Chae SC, Lee J-H, Park SU
  Recent studies on flavonoids and their antioxidant activities
  EXCLI Journal 2013;12:226-230
  
  
• Uddin R, Kim HH, Lee J-H, Park SU
  Neuroprotective effects of medicinal plants
  EXCLI Journal 2013;12:541-545
  
  
• Hammad S
  Interaction of genetic variants towards increased cancer risk
  EXCLI Journal 2013;12:625-627
  
  
• Selinski S
  Highlight report: Functional consequences of urinary bladder cancer risk variants
  EXCLI Journal 2013;12:1017-1019
  
  
• Blaszkewicz M
  Improved genotyping of N-acetyltransferase 2: role of the ultra-slow acetylators
  EXCLI Journal 2013;12:1020-1023
  
  
• Bolt HM
  Transcriptomics in developmental toxicity testing
  EXCLI Journal 2013;12:1027-1029

Letters to the editor

• Das Gupta E, Goh EML, Gun SC, Hussein H, Shahril NS, Yeap SS, Sakthiswary R
  Osteoporosis awareness among primary care physicians in Malaysia
  EXCLI Journal 2013;12:521-522
  
  
• Hammad S
  Advances in 2D and 3D in vitro systems for hepatotoxicity testing
  EXCLI Journal 2013;12:993-996
  
  
• Ghallab A
  In vitro test systems and their limitations
  EXCLI Journal 2013;12:1024-1026