TF JASPAR ID Class Family Tax Group IC GC Content Target gene hits Target gene non-hits Background gene hits Background gene non-hits Target TFBS hits Target TFBS nucleotide rate Background TFBS hits Background TFBS nucleotide rate Z-score Fisher score Nkx2-5 MA0063.1 Helix-Turn-Helix Homeo vertebrates 8.270 0.218 112 11 16973 7779 2990 0.0534 197210 0.0384 48.921 19.712 HOXA5 MA0158.1 Helix-Turn-Helix Homeo vertebrates 8.759 0.315 106 17 17629 7123 2963 0.0604 205993 0.0458 43.871 9.494 ARID3A MA0151.1 Helix-Turn-Helix Arid vertebrates 9.896 0.062 101 22 16086 8666 2513 0.0384 166235 0.0277 40.923 10.686 SRY MA0084.1 Other Alpha-Helix High Mobility Group vertebrates 9.193 0.238 98 25 14714 10038 1533 0.0352 101929 0.0255 38.483 13.352 Pdx1 MA0132.1 Helix-Turn-Helix Homeo vertebrates 9.040 0.194 98 25 15507 9245 2125 0.0325 140973 0.0235 37.217 10.198 Sox5 MA0087.1 Other Alpha-Helix High Mobility Group vertebrates 10.831 0.199 85 38 13087 11665 1130 0.0202 72042 0.014 32.784 8.580 TBP MA0108.2 Beta-sheet TATA-binding vertebrates 10.086 0.377 70 53 10389 14363 524 0.02 33775 0.0141 31.688 7.393 Prrx2 MA0075.1 Helix-Turn-Helix Homeo vertebrates 9.063 0.027 99 24 15063 9689 1856 0.0237 123270 0.0171 31.532 12.873 Nobox MA0125.1 Helix-Turn-Helix Homeo vertebrates 9.573 0.260 93 30 13558 11194 1153 0.0235 77190 0.0172 30.658 13.409 Foxd3 MA0041.1 Winged Helix-Turn-Helix Forkhead vertebrates 12.945 0.223 84 39 11354 13398 741 0.0227 49535 0.0165 30.232 14.591 FOXA1 MA0148.1 Winged Helix-Turn-Helix Forkhead vertebrates 12.533 0.332 93 30 13355 11397 921 0.0258 63112 0.0193 29.769 14.287 Foxa2 MA0047.2 Winged Helix-Turn-Helix Forkhead vertebrates 13.268 0.315 80 43 11656 13096 659 0.0202 43535 0.0145 29.555 9.946 FOXI1 MA0042.1 Winged Helix-Turn-Helix Forkhead vertebrates 13.183 0.263 83 40 11680 13072 728 0.0223 49366 0.0165 28.603 12.273 FOXD1 MA0031.1 Winged Helix-Turn-Helix Forkhead vertebrates 11.926 0.275 94 29 13087 11665 948 0.0193 62921 0.014 28.519 16.538 NKX3-1 MA0124.1 Helix-Turn-Helix Homeo vertebrates 11.127 0.179 84 39 12654 12098 1025 0.0183 68823 0.0134 26.732 9.344 FOXO3 MA0157.1 Winged Helix-Turn-Helix Forkhead vertebrates 11.734 0.298 98 25 13611 11141 1014 0.0207 69410 0.0154 26.684 18.445 SOX9 MA0077.1 Other Alpha-Helix High Mobility Group vertebrates 9.079 0.358 80 43 11417 13335 634 0.0145 41403 0.0104 25.938 10.851 Sox17 MA0078.1 Other Alpha-Helix High Mobility Group vertebrates 10.502 0.384 91 32 13879 10873 910 0.0209 65883 0.0165 21.665 10.362 CEBPA MA0102.2 Zipper-Type Leucine Zipper vertebrates 8.712 0.358 88 35 12828 11924 777 0.0178 55606 0.0139 20.975 11.898 NFATC2 MA0152.1 Ig-fold Rel vertebrates 9.859 0.346 99 24 15176 9576 1310 0.0234 97757 0.019 20.011 12.406 Foxq1 MA0040.1 Winged Helix-Turn-Helix Forkhead vertebrates 14.070 0.202 67 56 8007 16745 334 0.00937 22088 0.00675 19.996 14.807 IRF1 MA0050.1 Winged Helix-Turn-Helix IRF vertebrates 16.008 0.383 56 67 6075 18677 183 0.0056 11517 0.00384 17.794 14.851 Lhx3 MA0135.1 Helix-Turn-Helix Homeo vertebrates 16.354 0.131 47 76 5806 18946 189 0.00626 12758 0.00461 15.299 8.587 Gfi MA0038.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 9.470 0.391 91 32 13731 11021 841 0.0214 65844 0.0183 14.695 10.919 HNF1A MA0046.1 Helix-Turn-Helix Homeo vertebrates 15.548 0.259 38 85 3044 21708 74 0.00264 4352 0.00169 14.428 16.841 HNF1B MA0153.1 Helix-Turn-Helix Homeo vertebrates 16.821 0.222 42 81 4107 20645 111 0.0034 6910 0.0023 14.247 13.222 SPIB MA0081.1 Winged Helix-Turn-Helix Ets vertebrates 9.060 0.466 107 16 17547 7205 2145 0.0383 175639 0.0342 14.196 10.786 Gata1 MA0035.2 Zinc-coordinating GATA vertebrates 10.878 0.373 96 27 14350 10402 946 0.0265 75905 0.0232 13.849 12.934 NFIL3 MA0025.1 Zipper-Type Leucine Zipper vertebrates 14.139 0.265 57 66 6731 18021 227 0.00637 15828 0.00484 13.784 12.277 Pax4 MA0068.1 Helix-Turn-Helix Homeo vertebrates 11.004 0.441 4 119 112 24640 4 0.000306 113 9.42e-05 13.582 5.929 Pou5f1 MA0142.1 Helix-Turn-Helix Homeo vertebrates 14.808 0.308 36 87 3402 21350 82 0.00314 5205 0.00217 12.993 11.965 HLF MA0043.1 Zipper-Type Leucine Zipper vertebrates 11.147 0.394 55 68 5508 19244 147 0.0045 9969 0.00332 12.753 17.313 AP1 MA0099.2 Zipper-Type Leucine Zipper vertebrates 9.193 0.405 103 20 16390 8362 1376 0.0246 113253 0.022 10.785 11.392 FOXF2 MA0030.1 Winged Helix-Turn-Helix Forkhead vertebrates 14.824 0.334 41 82 4097 20655 94 0.00336 6459 0.00251 10.525 12.323 Sox2 MA0143.1 Other Alpha-Helix High Mobility Group vertebrates 12.951 0.361 29 94 2809 21943 59 0.00226 3844 0.0016 10.224 9.178 Nkx3-2 MA0122.1 Helix-Turn-Helix Homeo vertebrates 8.542 0.463 99 24 15425 9327 1095 0.0251 91612 0.0229 9.269 11.407 MEF2A MA0052.1 Other Alpha-Helix MADS vertebrates 15.709 0.179 52 71 7006 17746 208 0.0053 15631 0.00434 9.128 7.344 PBX1 MA0070.1 Helix-Turn-Helix Homeo vertebrates 14.641 0.310 41 82 4107 20645 94 0.00288 6634 0.00221 8.833 12.262 ELF5 MA0136.1 Winged Helix-Turn-Helix Ets vertebrates 8.693 0.429 107 16 16547 8205 1372 0.0315 117435 0.0294 7.836 15.051 Pax5 MA0014.1 Helix-Turn-Helix Homeo vertebrates 12.432 0.575 16 107 1224 23528 21 0.00107 1364 0.000758 7.089 7.800 YY1 MA0095.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 8.101 0.510 108 15 17190 7562 1909 0.0292 165054 0.0275 6.446 13.356 Ddit3::Cebpa MA0019.1 Zipper-Type Leucine Zipper vertebrates 11.652 0.483 46 77 5576 19176 125 0.00382 9754 0.00325 6.277 8.842 RORA_2 MA0072.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 17.425 0.369 35 88 3571 21181 67 0.00239 5079 0.00198 5.845 9.981 Nr2e3 MA0164.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 12.028 0.373 54 69 6354 18398 159 0.00284 12287 0.00239 5.727 11.579 FEV MA0156.1 Winged Helix-Turn-Helix Ets vertebrates 12.121 0.442 101 22 15402 9350 943 0.0192 81722 0.0182 5.001 13.457 T MA0009.1 Beta-Hairpin-Ribbon T vertebrates 17.863 0.452 22 101 1811 22941 30 0.000841 2114 0.000646 4.780 9.338 RUNX1 MA0002.2 Ig-fold Runt vertebrates 10.401 0.502 90 33 13641 11111 674 0.0189 58648 0.0179 4.603 10.431 MAX MA0058.1 Zipper-Type Helix-Loop-Helix vertebrates 12.685 0.571 67 56 7993 16759 190 0.00484 15900 0.00442 4.012 14.878 SRF MA0083.1 Other Alpha-Helix MADS vertebrates 17.965 0.466 12 111 908 23844 15 0.000459 1019 0.00034 4.005 6.193 Pax6 MA0069.1 Helix-Turn-Helix Homeo vertebrates 13.798 0.432 17 106 1218 23534 19 0.000678 1377 0.000536 3.823 8.993 Ar MA0007.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 15.703 0.498 7 116 534 24218 8 0.000449 554 0.000339 3.703 4.010 Tal1::Gata1 MA0140.1 Zipper-Type Helix-Loop-Helix vertebrates 11.297 0.451 48 75 6212 18540 131 0.00601 11200 0.0056 3.430 7.647 IRF2 MA0051.1 Winged Helix-Turn-Helix IRF vertebrates 21.134 0.412 11 112 844 23908 12 0.000551 923 0.000462 2.559 5.661 TAL1::TCF3 MA0091.1 Zipper-Type Helix-Loop-Helix vertebrates 14.070 0.453 63 60 7491 17261 169 0.00517 14681 0.0049 2.459 13.763 SPI1 MA0080.2 Winged Helix-Turn-Helix Ets vertebrates 9.640 0.435 99 24 15792 8960 1072 0.0191 95792 0.0186 2.309 10.008 EWSR1-FLI1 MA0149.1 Winged Helix-Turn-Helix Ets vertebrates 32.871 0.554 3 120 207 24545 3 0.000138 209 0.000105 1.952 2.450 REL MA0101.1 Ig-fold Rel vertebrates 10.515 0.559 72 51 10514 14238 329 0.00839 29250 0.00813 1.808 8.284 TEAD1 MA0090.1 Helix-Turn-Helix Homeo vertebrates 15.678 0.507 41 82 5222 19530 96 0.00294 8446 0.00282 1.413 6.778 RXRA::VDR MA0074.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 20.451 0.527 6 117 453 24299 6 0.000229 475 0.000198 1.345 3.622 STAT1 MA0137.2 Ig-fold Stat vertebrates 13.119 0.452 47 76 6394 18358 122 0.00467 10990 0.00458 0.777 6.340 MIZF MA0131.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 13.197 0.610 19 104 2080 22672 28 0.000714 2497 0.000694 0.446 4.923 NR3C1 MA0113.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 14.749 0.432 23 100 2522 22230 35 0.00161 3161 0.00158 0.377 5.761 RORA_1 MA0071.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 13.190 0.424 66 57 8624 16128 207 0.00528 18895 0.00525 0.226 11.070 RREB1 MA0073.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 22.278 0.623 12 111 1520 23232 20 0.00102 1839 0.00102 -0.067 2.569 NR2F1 MA0017.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 15.924 0.478 29 94 3735 21017 54 0.00193 5073 0.00197 -0.667 4.731 NR4A2 MA0160.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 10.165 0.491 93 30 13896 10856 643 0.0131 60034 0.0133 -1.263 12.011 RXR::RAR_DR5 MA0159.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 16.004 0.535 9 114 1313 23439 15 0.00065 1499 0.000708 -1.394 1.573 E2F1 MA0024.1 Winged Helix-Turn-Helix E2F vertebrates 13.838 0.625 52 71 8113 16639 185 0.00377 17630 0.00392 -1.473 4.049 NFE2L2 MA0150.1 Zipper-Type Leucine Zipper vertebrates 14.394 0.486 39 84 5635 19117 93 0.00261 8970 0.00274 -1.614 4.236 TP53 MA0106.1 Zinc-coordinating Loop-Sheet-Helix vertebrates 26.239 0.603 0 123 8 24744 0 0 8 4.45e-06 -1.699 0.000 RELA MA0107.1 Ig-fold Rel vertebrates 14.757 0.567 53 70 7171 17581 142 0.00362 13690 0.0038 -1.881 7.401 znf143 MA0088.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 17.541 0.530 12 111 1301 23451 14 0.000714 1473 0.000819 -2.321 3.528 Hand1::Tcfe2a MA0092.1 Zipper-Type Helix-Loop-Helix vertebrates 10.144 0.507 90 33 13286 11466 577 0.0147 54768 0.0152 -2.601 11.800 Arnt::Ahr MA0006.1 Zipper-Type Helix-Loop-Helix vertebrates 9.532 0.715 87 36 13597 11155 691 0.0106 66086 0.011 -2.692 8.302 TLX1::NFIC MA0119.1 Helix-Turn-Helix::Other Homeo::Nuclear Factor I-CCAAT-binding vertebrates 19.665 0.598 9 114 1066 23686 10 0.000357 1162 0.000452 -2.839 2.459 USF1 MA0093.1 Zipper-Type Helix-Loop-Helix vertebrates 11.290 0.643 67 56 9330 15422 222 0.00396 21993 0.00428 -3.042 9.028 ESR2 MA0258.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 13.618 0.546 19 104 2219 22533 25 0.00115 2670 0.00134 -3.248 4.279 MZF1_5-13 MA0057.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 9.400 0.588 88 35 13425 11327 816 0.0208 77649 0.0216 -3.331 9.633 Myb MA0100.1 Helix-Turn-Helix Myb vertebrates 9.883 0.591 88 35 13518 11234 605 0.0123 58600 0.013 -3.799 9.304 PPARG MA0066.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 20.365 0.523 0 123 62 24690 0 0 64 3.56e-05 -3.869 0.000 Stat3 MA0144.1 Ig-fold Stat vertebrates 13.601 0.505 69 54 9883 14869 237 0.00604 23645 0.00657 -4.100 8.430 Esrrb MA0141.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 12.806 0.524 69 54 10167 14585 267 0.00817 26346 0.00878 -4.143 7.475 Evi1 MA0029.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 17.909 0.280 15 108 1931 22821 21 0.00075 2457 0.000956 -4.206 2.864 CREB1 MA0018.2 Zipper-Type Leucine Zipper vertebrates 10.139 0.523 55 68 9204 15548 193 0.00394 19712 0.00438 -4.235 2.943 PLAG1 MA0163.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 19.352 0.798 13 110 1971 22781 21 0.00075 2462 0.000958 -4.241 1.705 CTCF MA0139.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 17.205 0.645 25 98 3236 21516 37 0.00179 3982 0.0021 -4.255 4.119 Arnt MA0004.1 Zipper-Type Helix-Loop-Helix vertebrates 10.992 0.642 57 66 7052 17700 130 0.00199 13904 0.00232 -4.307 10.770 NR1H2::RXRA MA0115.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 27.878 0.445 0 123 99 24653 0 0 100 4.72e-05 -4.421 0.000 ELK1 MA0028.1 Winged Helix-Turn-Helix Ets vertebrates 8.812 0.568 88 35 13642 11110 561 0.0143 54748 0.0152 -4.661 8.874 NF-kappaB MA0061.1 Ig-fold Rel vertebrates 13.345 0.621 57 66 8381 16371 182 0.00464 18865 0.00524 -5.230 5.868 HNF4A MA0114.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 9.617 0.522 46 77 6389 18363 106 0.00351 11240 0.00406 -5.399 5.761 PPARG::RXRA MA0065.2 Zinc-coordinating Hormone-nuclear Receptor vertebrates 11.663 0.547 40 83 6067 18685 105 0.00402 11080 0.00462 -5.578 3.577 ZEB1 MA0103.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 8.305 0.557 111 12 17454 7298 1765 0.027 171132 0.0285 -5.765 15.883 MYC::MAX MA0059.1 Zipper-Type Helix-Loop-Helix vertebrates 14.237 0.602 22 101 3436 21316 37 0.00104 4535 0.00139 -5.887 2.066 Spz1 MA0111.1 Other Other vertebrates 11.907 0.538 48 75 6658 18094 114 0.0032 12530 0.00383 -6.428 6.058 ESR1 MA0112.2 Zinc-coordinating Hormone-nuclear Receptor vertebrates 13.563 0.594 1 122 345 24407 1 5.1e-05 355 0.000197 -6.580 0.196 NFKB1 MA0105.1 Ig-fold Rel vertebrates 15.627 0.758 25 98 3946 20806 52 0.00146 6372 0.00195 -6.968 2.147 REST MA0138.2 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 23.134 0.596 0 123 232 24520 0 0 242 0.000141 -7.510 0.000 NFYA MA0060.1 Other Alpha-Helix NFY CCAAT-binding vertebrates 12.925 0.523 44 79 5865 18887 83 0.00339 9476 0.00421 -8.010 6.329 Myf MA0055.1 Zipper-Type Helix-Loop-Helix vertebrates 15.914 0.609 67 56 10157 14595 258 0.00789 27519 0.00918 -8.432 6.297 ELK4 MA0076.1 Winged Helix-Turn-Helix Ets vertebrates 14.123 0.583 42 81 6034 18718 73 0.00168 9342 0.00234 -8.594 4.641 Tcfcp2l1 MA0145.1 Other CP2 vertebrates 11.650 0.609 73 50 10591 14161 304 0.0109 32190 0.0125 -9.420 8.702 INSM1 MA0155.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 14.862 0.667 48 75 7588 17164 155 0.00474 17685 0.0059 -9.456 3.508 Egr1 MA0162.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 14.456 0.739 49 74 6364 18388 100 0.0028 12188 0.00373 -9.479 7.740 EBF1 MA0154.1 Zipper-Type Helix-Loop-Helix vertebrates 11.564 0.648 80 43 11288 13464 358 0.00913 39149 0.0109 -10.578 11.360 NHLH1 MA0048.1 Zipper-Type Helix-Loop-Helix vertebrates 14.132 0.674 42 81 5783 18969 76 0.00233 9874 0.00329 -10.588 5.410 ZNF354C MA0130.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 8.958 0.615 108 15 17566 7186 2038 0.0312 207738 0.0346 -11.848 11.759 Myc MA0147.1 Zipper-Type Helix-Loop-Helix vertebrates 11.157 0.686 58 65 8288 16464 148 0.00377 18476 0.00513 -11.934 6.738 Mycn MA0104.2 Zipper-Type Helix-Loop-Helix vertebrates 11.104 0.699 58 65 8332 16420 148 0.00377 18928 0.00526 -12.878 6.597 Zfp423 MA0116.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 17.925 0.679 29 94 5691 19061 75 0.00287 10149 0.00423 -13.154 0.747 HIF1A::ARNT MA0259.1 Zipper-Type Helix-Loop-Helix vertebrates 9.740 0.657 79 44 10914 13838 315 0.00642 37662 0.00837 -13.392 12.056 GABPA MA0062.2 Winged Helix-Turn-Helix Ets vertebrates 13.335 0.647 59 64 9355 15397 161 0.00452 20927 0.0064 -14.788 4.287 MZF1_1-4 MA0056.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 8.586 0.725 104 19 16863 7889 1901 0.0291 201000 0.0335 -15.422 10.506 Zfx MA0146.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 13.077 0.749 66 57 9872 14880 269 0.0096 33238 0.0129 -18.458 6.564 SP1 MA0079.2 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 11.129 0.820 86 37 12391 12361 644 0.0164 79797 0.0222 -24.478 11.938 Klf4 MA0039.2 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 12.618 0.771 91 32 13645 11107 676 0.0172 88731 0.0247 -29.973 11.251