TF JASPAR ID Class Family Tax Group IC GC Content Target gene hits Target gene non-hits Background gene hits Background gene non-hits Target TFBS hits Target TFBS nucleotide rate Background TFBS hits Background TFBS nucleotide rate Z-score Fisher score FOXA1 MA0148.1 Winged Helix-Turn-Helix Forkhead vertebrates 12.533 0.332 61 34 13355 11397 268 0.0247 63112 0.0193 13.516 3.574 TBP MA0108.2 Beta-sheet TATA-binding vertebrates 10.086 0.377 46 49 10389 14363 145 0.0182 33775 0.0141 12.093 2.104 Lhx3 MA0135.1 Helix-Turn-Helix Homeo vertebrates 16.354 0.131 26 69 5806 18946 63 0.00685 12758 0.00461 11.441 1.532 NFIL3 MA0025.1 Zipper-Type Leucine Zipper vertebrates 14.139 0.265 28 67 6731 18021 77 0.00709 15828 0.00484 11.193 1.063 ARID3A MA0151.1 Helix-Turn-Helix Arid vertebrates 9.896 0.062 57 38 16086 8666 647 0.0325 166235 0.0277 10.046 0.140 Pou5f1 MA0142.1 Helix-Turn-Helix Homeo vertebrates 14.808 0.308 15 80 3402 21350 28 0.00352 5205 0.00217 9.966 1.128 Nkx2-5 MA0063.1 Helix-Turn-Helix Homeo vertebrates 8.270 0.218 67 28 16973 7779 746 0.0437 197210 0.0384 9.614 0.948 Foxa2 MA0047.2 Winged Helix-Turn-Helix Forkhead vertebrates 13.268 0.315 49 46 11656 13096 176 0.0177 43535 0.0145 9.120 1.514 FOXD1 MA0031.1 Winged Helix-Turn-Helix Forkhead vertebrates 11.926 0.275 54 41 13087 11665 251 0.0168 62921 0.014 8.284 1.380 Prrx2 MA0075.1 Helix-Turn-Helix Homeo vertebrates 9.063 0.027 62 33 15063 9689 482 0.0202 123270 0.0171 8.098 1.511 Sox2 MA0143.1 Other Alpha-Helix High Mobility Group vertebrates 12.951 0.361 11 84 2809 21943 20 0.00251 3844 0.0016 7.817 0.654 HOXA5 MA0158.1 Helix-Turn-Helix Homeo vertebrates 8.759 0.315 68 27 17629 7123 752 0.0504 205993 0.0458 7.532 0.652 Tal1::Gata1 MA0140.1 Zipper-Type Helix-Loop-Helix vertebrates 11.297 0.451 22 73 6212 18540 48 0.00723 11200 0.0056 7.527 0.349 HNF1A MA0046.1 Helix-Turn-Helix Homeo vertebrates 15.548 0.259 18 77 3044 21708 22 0.00258 4352 0.00169 7.404 3.199 Pdx1 MA0132.1 Helix-Turn-Helix Homeo vertebrates 9.040 0.194 61 34 15507 9245 532 0.0267 140973 0.0235 7.319 0.865 FOXF2 MA0030.1 Winged Helix-Turn-Helix Forkhead vertebrates 14.824 0.334 16 79 4097 20655 29 0.0034 6459 0.00251 6.084 0.668 FOXI1 MA0042.1 Winged Helix-Turn-Helix Forkhead vertebrates 13.183 0.263 51 44 11680 13072 186 0.0187 49366 0.0165 6.019 2.100 IRF1 MA0050.1 Winged Helix-Turn-Helix IRF vertebrates 16.008 0.383 31 64 6075 18677 49 0.00492 11517 0.00384 6.018 3.060 Sox5 MA0087.1 Other Alpha-Helix High Mobility Group vertebrates 10.831 0.199 48 47 13087 11665 273 0.016 72042 0.014 5.814 0.339 AP1 MA0099.2 Zipper-Type Leucine Zipper vertebrates 9.193 0.405 66 29 16390 8362 418 0.0245 113253 0.022 5.784 1.237 MEF2A MA0052.1 Other Alpha-Helix MADS vertebrates 15.709 0.179 27 68 7006 17746 64 0.00536 15631 0.00434 5.303 0.637 Foxq1 MA0040.1 Winged Helix-Turn-Helix Forkhead vertebrates 14.070 0.202 35 60 8007 16745 87 0.00801 22088 0.00675 5.293 1.591 Gfi MA0038.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 9.470 0.391 53 42 13731 11021 242 0.0203 65844 0.0183 5.039 0.658 SRY MA0084.1 Other Alpha-Helix High Mobility Group vertebrates 9.193 0.238 57 38 14714 10038 368 0.0277 101929 0.0255 4.879 0.692 NKX3-1 MA0124.1 Helix-Turn-Helix Homeo vertebrates 11.127 0.179 49 46 12654 12098 256 0.015 68823 0.0134 4.834 0.681 Ddit3::Cebpa MA0019.1 Zipper-Type Leucine Zipper vertebrates 11.652 0.483 26 69 5576 19176 40 0.00402 9754 0.00325 4.618 1.848 Nobox MA0125.1 Helix-Turn-Helix Homeo vertebrates 9.573 0.260 50 45 13558 11194 282 0.0189 77190 0.0172 4.573 0.357 STAT1 MA0137.2 Ig-fold Stat vertebrates 13.119 0.452 25 70 6394 18358 43 0.0054 10990 0.00458 4.164 0.700 FOXO3 MA0157.1 Winged Helix-Turn-Helix Forkhead vertebrates 11.734 0.298 50 45 13611 11141 251 0.0168 69410 0.0154 3.848 0.336 HNF1B MA0153.1 Helix-Turn-Helix Homeo vertebrates 16.821 0.222 19 76 4107 20645 28 0.00281 6910 0.0023 3.632 1.506 ESR1 MA0112.2 Zinc-coordinating Hormone-nuclear Receptor vertebrates 13.563 0.594 2 93 345 24407 2 0.000335 355 0.000197 3.281 0.958 ESR2 MA0258.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 13.618 0.546 10 85 2219 22533 11 0.00166 2670 0.00134 3.005 1.059 HLF MA0043.1 Zipper-Type Leucine Zipper vertebrates 11.147 0.394 24 71 5508 19244 38 0.00382 9969 0.00332 2.932 1.288 PBX1 MA0070.1 Helix-Turn-Helix Homeo vertebrates 14.641 0.310 18 77 4107 20645 26 0.00261 6634 0.00221 2.906 1.177 RELA MA0107.1 Ig-fold Rel vertebrates 14.757 0.567 25 70 7171 17581 50 0.00418 13690 0.0038 2.114 0.288 Foxd3 MA0041.1 Winged Helix-Turn-Helix Forkhead vertebrates 12.945 0.223 47 48 11354 13398 172 0.0173 49535 0.0165 2.043 1.296 EWSR1-FLI1 MA0149.1 Winged Helix-Turn-Helix Ets vertebrates 32.871 0.554 1 94 207 24545 1 0.000151 209 0.000105 1.418 0.597 Evi1 MA0029.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 17.909 0.280 7 88 1931 22821 9 0.00105 2457 0.000956 1.058 0.482 PLAG1 MA0163.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 19.352 0.798 9 86 1971 22781 9 0.00105 2462 0.000958 1.035 1.064 RORA_2 MA0072.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 17.425 0.369 14 81 3571 21181 18 0.00211 5079 0.00198 1.005 0.673 SOX9 MA0077.1 Other Alpha-Helix High Mobility Group vertebrates 9.079 0.358 35 60 11417 13335 140 0.0105 41403 0.0104 0.639 0.027 TAL1::TCF3 MA0091.1 Zipper-Type Helix-Loop-Helix vertebrates 14.070 0.453 26 69 7491 17261 50 0.00502 14681 0.0049 0.605 0.270 CEBPA MA0102.2 Zipper-Type Leucine Zipper vertebrates 8.712 0.358 51 44 12828 11924 187 0.0141 55606 0.0139 0.518 0.920 NFATC2 MA0152.1 Ig-fold Rel vertebrates 9.859 0.346 56 39 15176 9576 326 0.0191 97757 0.019 0.203 0.329 HNF4A MA0114.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 9.617 0.522 25 70 6389 18363 37 0.00403 11240 0.00406 -0.210 0.704 IRF2 MA0051.1 Winged Helix-Turn-Helix IRF vertebrates 21.134 0.412 3 92 844 23908 3 0.000452 923 0.000462 -0.223 0.457 Nr2e3 MA0164.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 12.028 0.373 25 70 6354 18398 40 0.00234 12287 0.00239 -0.359 0.730 Gata1 MA0035.2 Zinc-coordinating GATA vertebrates 10.878 0.373 53 42 14350 10402 248 0.0228 75905 0.0232 -0.857 0.350 RUNX1 MA0002.2 Ig-fold Runt vertebrates 10.401 0.502 47 48 13641 11111 191 0.0176 58648 0.0179 -0.902 0.121 RORA_1 MA0071.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 13.190 0.424 29 66 8624 16128 60 0.00502 18895 0.00525 -1.114 0.176 Pax5 MA0014.1 Helix-Turn-Helix Homeo vertebrates 12.432 0.575 3 92 1224 23528 4 0.00067 1364 0.000758 -1.164 0.158 T MA0009.1 Beta-Hairpin-Ribbon T vertebrates 17.863 0.452 6 89 1811 22941 6 0.000552 2114 0.000646 -1.333 0.353 TP53 MA0106.1 Zinc-coordinating Loop-Sheet-Helix vertebrates 26.239 0.603 0 95 8 24744 0 0 8 4.45e-06 -1.415 0.000 FEV MA0156.1 Winged Helix-Turn-Helix Ets vertebrates 12.121 0.442 60 35 15402 9350 263 0.0176 81722 0.0182 -1.453 0.753 MIZF MA0131.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 13.197 0.610 7 88 2080 22672 7 0.000586 2497 0.000694 -1.472 0.363 Sox17 MA0078.1 Other Alpha-Helix High Mobility Group vertebrates 10.502 0.384 51 44 13879 10873 211 0.0159 65883 0.0165 -1.594 0.333 TLX1::NFIC MA0119.1 Helix-Turn-Helix::Other Homeo::Nuclear Factor I-CCAAT-binding vertebrates 19.665 0.598 3 92 1066 23686 3 0.000352 1162 0.000452 -1.703 0.247 NR2F1 MA0017.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 15.924 0.478 14 81 3735 21017 15 0.00176 5073 0.00197 -1.714 0.541 ELF5 MA0136.1 Winged Helix-Turn-Helix Ets vertebrates 8.693 0.429 60 35 16547 8205 377 0.0284 117435 0.0294 -1.997 0.212 Esrrb MA0141.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 12.806 0.524 32 63 10167 14585 82 0.00824 26346 0.00878 -2.051 0.059 Hand1::Tcfe2a MA0092.1 Zipper-Type Helix-Loop-Helix vertebrates 10.144 0.507 46 49 13286 11466 173 0.0145 54768 0.0152 -2.099 0.139 PPARG MA0066.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 20.365 0.523 0 95 62 24690 0 0 64 3.56e-05 -2.304 0.000 NR4A2 MA0160.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 10.165 0.491 51 44 13896 10856 187 0.0125 60034 0.0133 -2.497 0.326 MAX MA0058.1 Zipper-Type Helix-Loop-Helix vertebrates 12.685 0.571 28 67 7993 16759 47 0.00393 15900 0.00442 -2.547 0.281 NR1H2::RXRA MA0115.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 27.878 0.445 0 95 99 24653 0 0 100 4.72e-05 -2.586 0.000 TEAD1 MA0090.1 Helix-Turn-Helix Homeo vertebrates 15.678 0.507 18 77 5222 19530 24 0.00241 8446 0.00282 -2.675 0.310 CTCF MA0139.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 17.205 0.645 10 85 3236 21516 11 0.00175 3982 0.0021 -2.696 0.210 Stat3 MA0144.1 Ig-fold Stat vertebrates 13.601 0.505 35 60 9883 14869 71 0.00594 23645 0.00657 -2.705 0.271 ELK4 MA0076.1 Winged Helix-Turn-Helix Ets vertebrates 14.123 0.583 19 76 6034 18718 26 0.00196 9342 0.00234 -2.735 0.141 USF1 MA0093.1 Zipper-Type Helix-Loop-Helix vertebrates 11.290 0.643 29 66 9330 15422 64 0.00375 21993 0.00428 -2.820 0.061 NHLH1 MA0048.1 Zipper-Type Helix-Loop-Helix vertebrates 14.132 0.674 18 77 5783 18969 28 0.00281 9874 0.00329 -2.923 0.135 NFE2L2 MA0150.1 Zipper-Type Leucine Zipper vertebrates 14.394 0.486 14 81 5635 19117 25 0.0023 8970 0.00274 -2.937 0.019 Ar MA0007.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 15.703 0.498 1 94 534 24218 1 0.000184 554 0.000339 -2.982 0.135 Myf MA0055.1 Zipper-Type Helix-Loop-Helix vertebrates 15.914 0.609 36 59 10157 14595 83 0.00834 27519 0.00918 -3.061 0.268 NR3C1 MA0113.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 14.749 0.432 7 88 2522 22230 8 0.00121 3161 0.00158 -3.306 0.149 Pax4 MA0068.1 Helix-Turn-Helix Homeo vertebrates 11.004 0.441 0 95 112 24640 0 0 113 9.42e-05 -3.504 0.000 RXR::RAR_DR5 MA0159.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 16.004 0.535 3 92 1313 23439 3 0.000427 1499 0.000708 -3.709 0.122 NFYA MA0060.1 Other Alpha-Helix NFY CCAAT-binding vertebrates 12.925 0.523 18 77 5865 18887 26 0.00348 9476 0.00421 -3.925 0.118 SPIB MA0081.1 Winged Helix-Turn-Helix Ets vertebrates 9.060 0.466 65 30 17547 7205 547 0.032 175639 0.0342 -4.036 0.298 REST MA0138.2 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 23.134 0.596 0 95 232 24520 0 0 242 0.000141 -4.230 0.000 E2F1 MA0024.1 Winged Helix-Turn-Helix E2F vertebrates 13.838 0.625 26 69 8113 16639 47 0.00315 17630 0.00392 -4.295 0.114 Arnt MA0004.1 Zipper-Type Helix-Loop-Helix vertebrates 10.992 0.642 23 72 7052 17700 34 0.00171 13904 0.00232 -4.420 0.162 Pax6 MA0069.1 Helix-Turn-Helix Homeo vertebrates 13.798 0.432 2 93 1218 23534 2 0.000234 1377 0.000536 -4.564 0.050 SRF MA0083.1 Other Alpha-Helix MADS vertebrates 17.965 0.466 1 94 908 23844 1 0.0001 1019 0.00034 -4.568 0.029 Myb MA0100.1 Helix-Turn-Helix Myb vertebrates 9.883 0.591 50 45 13518 11234 171 0.0114 58600 0.013 -4.821 0.373 RXRA::VDR MA0074.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 20.451 0.527 0 95 453 24299 0 0 475 0.000198 -4.967 0.000 CREB1 MA0018.2 Zipper-Type Leucine Zipper vertebrates 10.139 0.523 30 65 9204 15548 51 0.00341 19712 0.00438 -5.083 0.114 ELK1 MA0028.1 Winged Helix-Turn-Helix Ets vertebrates 8.812 0.568 51 44 13642 11110 157 0.0131 54748 0.0152 -5.866 0.430 znf143 MA0088.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 17.541 0.530 2 93 1301 23451 2 0.000335 1473 0.000819 -5.898 0.038 Arnt::Ahr MA0006.1 Zipper-Type Helix-Loop-Helix vertebrates 9.532 0.715 49 46 13597 11155 183 0.00919 66086 0.011 -6.068 0.253 MYC::MAX MA0059.1 Zipper-Type Helix-Loop-Helix vertebrates 14.237 0.602 8 87 3436 21316 8 0.000737 4535 0.00139 -6.075 0.039 SPI1 MA0080.2 Winged Helix-Turn-Helix Ets vertebrates 9.640 0.435 61 34 15792 8960 277 0.0162 95792 0.0186 -6.156 0.667 REL MA0101.1 Ig-fold Rel vertebrates 10.515 0.559 33 62 10514 14238 78 0.00653 29250 0.00813 -6.174 0.052 NF-kappaB MA0061.1 Ig-fold Rel vertebrates 13.345 0.621 27 68 8381 16371 47 0.00393 18865 0.00524 -6.283 0.115 Spz1 MA0111.1 Other Other vertebrates 11.907 0.538 16 79 6658 18094 29 0.00267 12530 0.00383 -6.515 0.008 NFKB1 MA0105.1 Ig-fold Rel vertebrates 15.627 0.758 7 88 3946 20806 11 0.00101 6372 0.00195 -7.363 0.004 RREB1 MA0073.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 22.278 0.623 2 93 1520 23232 2 0.000335 1839 0.00102 -7.480 0.018 Nkx3-2 MA0122.1 Helix-Turn-Helix Homeo vertebrates 8.542 0.463 54 41 15425 9327 259 0.0195 91612 0.0229 -7.868 0.122 PPARG::RXRA MA0065.2 Zinc-coordinating Hormone-nuclear Receptor vertebrates 11.663 0.547 17 78 6067 18685 24 0.00301 11080 0.00462 -8.205 0.050 GABPA MA0062.2 Winged Helix-Turn-Helix Ets vertebrates 13.335 0.647 29 66 9355 15397 48 0.00442 20927 0.0064 -8.592 0.059 Egr1 MA0162.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 14.456 0.739 18 77 6364 18388 23 0.00212 12188 0.00373 -9.147 0.050 EBF1 MA0154.1 Zipper-Type Helix-Loop-Helix vertebrates 11.564 0.648 38 57 11288 13464 97 0.00812 39149 0.0109 -9.211 0.122 YY1 MA0095.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 8.101 0.510 64 31 17190 7562 460 0.0231 165054 0.0275 -9.345 0.339 Myc MA0147.1 Zipper-Type Helix-Loop-Helix vertebrates 11.157 0.686 20 75 8288 16464 36 0.00301 18476 0.00513 -10.278 0.003 HIF1A::ARNT MA0259.1 Zipper-Type Helix-Loop-Helix vertebrates 9.740 0.657 41 54 10914 13838 84 0.00562 37662 0.00837 -10.440 0.492 Zfp423 MA0116.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 17.925 0.679 16 79 5691 19061 18 0.00226 10149 0.00423 -10.517 0.059 Mycn MA0104.2 Zipper-Type Helix-Loop-Helix vertebrates 11.104 0.699 20 75 8332 16420 36 0.00301 18928 0.00526 -10.756 0.003 INSM1 MA0155.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 14.862 0.667 21 74 7588 17164 33 0.00331 17685 0.0059 -11.679 0.025 MZF1_5-13 MA0057.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 9.400 0.588 54 41 13425 11327 176 0.0147 77649 0.0216 -16.297 1.068 ZNF354C MA0130.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 8.958 0.615 64 31 17566 7186 510 0.0256 207738 0.0346 -17.067 0.207 Tcfcp2l1 MA0145.1 Other CP2 vertebrates 11.650 0.609 33 62 10591 14161 59 0.00691 32190 0.0125 -17.449 0.046 ZEB1 MA0103.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 8.305 0.557 66 29 17454 7298 396 0.0199 171132 0.0285 -17.959 0.452 Zfx MA0146.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 13.077 0.749 30 65 9872 14880 57 0.00668 33238 0.0129 -19.140 0.039 Klf4 MA0039.2 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 12.618 0.771 49 46 13645 11107 192 0.0161 88731 0.0247 -19.149 0.239 SP1 MA0079.2 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 11.129 0.820 39 56 12391 12361 155 0.013 79797 0.0222 -21.608 0.032 MZF1_1-4 MA0056.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 8.586 0.725 60 35 16863 7889 425 0.0213 201000 0.0335 -23.381 0.135