TF JASPAR ID Class Family Tax Group IC GC Content Target gene hits Target gene non-hits Background gene hits Background gene non-hits Target TFBS hits Target TFBS nucleotide rate Background TFBS hits Background TFBS nucleotide rate Z-score Fisher score HOXA5 MA0158.1 Helix-Turn-Helix Homeo vertebrates 8.759 0.315 482 82 17629 7123 8263 0.0529 205993 0.0458 38.178 33.735 SPIB MA0081.1 Winged Helix-Turn-Helix Ets vertebrates 9.060 0.466 487 77 17547 7205 7108 0.0398 175639 0.0342 34.935 39.557 ELF5 MA0136.1 Winged Helix-Turn-Helix Ets vertebrates 8.693 0.429 476 88 16547 8205 4722 0.034 117435 0.0294 30.854 46.357 REL MA0101.1 Ig-fold Rel vertebrates 10.515 0.559 352 212 10514 14238 1301 0.0104 29250 0.00813 28.498 46.987 Nkx2-5 MA0063.1 Helix-Turn-Helix Homeo vertebrates 8.270 0.218 454 110 16973 7779 7713 0.0432 197210 0.0384 28.359 22.308 FOXI1 MA0042.1 Winged Helix-Turn-Helix Forkhead vertebrates 13.183 0.263 361 203 11680 13072 2046 0.0197 49366 0.0165 28.095 34.159 AP1 MA0099.2 Zipper-Type Leucine Zipper vertebrates 9.193 0.405 472 92 16390 8362 4536 0.0254 113253 0.022 25.859 45.291 SRY MA0084.1 Other Alpha-Helix High Mobility Group vertebrates 9.193 0.238 427 137 14714 10038 4028 0.029 101929 0.0255 25.084 34.960 FEV MA0156.1 Winged Helix-Turn-Helix Ets vertebrates 12.121 0.442 464 100 15402 9350 3292 0.0211 81722 0.0182 24.448 55.538 CEBPA MA0102.2 Zipper-Type Leucine Zipper vertebrates 8.712 0.358 394 170 12828 11924 2278 0.0164 55606 0.0139 23.958 39.787 Pdx1 MA0132.1 Helix-Turn-Helix Homeo vertebrates 9.040 0.194 442 122 15507 9245 5560 0.0267 140973 0.0235 23.675 34.227 NF-kappaB MA0061.1 Ig-fold Rel vertebrates 13.345 0.621 308 256 8381 16371 842 0.00674 18865 0.00524 23.212 52.462 SPI1 MA0080.2 Winged Helix-Turn-Helix Ets vertebrates 9.640 0.435 465 99 15792 8960 3825 0.0214 95792 0.0186 23.201 49.264 NFATC2 MA0152.1 Ig-fold Rel vertebrates 9.859 0.346 432 132 15176 9576 3888 0.0218 97757 0.019 22.733 31.750 TBP MA0108.2 Beta-sheet TATA-binding vertebrates 10.086 0.377 320 244 10389 14363 1362 0.0164 33775 0.0141 21.641 26.832 FOXA1 MA0148.1 Winged Helix-Turn-Helix Forkhead vertebrates 12.533 0.332 394 170 13355 11397 2490 0.0219 63112 0.0193 21.463 31.710 Foxd3 MA0041.1 Winged Helix-Turn-Helix Forkhead vertebrates 12.945 0.223 355 209 11354 13398 1973 0.019 49535 0.0165 21.404 35.057 SOX9 MA0077.1 Other Alpha-Helix High Mobility Group vertebrates 9.079 0.358 348 216 11417 13335 1704 0.0123 41403 0.0104 21.260 29.534 FOXO3 MA0157.1 Winged Helix-Turn-Helix Forkhead vertebrates 11.734 0.298 404 160 13611 11141 2763 0.0177 69410 0.0154 20.581 34.881 RELA MA0107.1 Ig-fold Rel vertebrates 14.757 0.567 269 295 7171 17581 612 0.0049 13690 0.0038 19.899 45.559 Hand1::Tcfe2a MA0092.1 Zipper-Type Helix-Loop-Helix vertebrates 10.144 0.507 394 170 13286 11466 2164 0.0173 54768 0.0152 19.257 32.714 Prrx2 MA0075.1 Helix-Turn-Helix Homeo vertebrates 9.063 0.027 429 135 15063 9689 4835 0.0194 123270 0.0171 19.219 31.249 MEF2A MA0052.1 Other Alpha-Helix MADS vertebrates 15.709 0.179 239 325 7006 17746 683 0.00547 15631 0.00434 19.124 27.441 ARID3A MA0151.1 Helix-Turn-Helix Arid vertebrates 9.896 0.062 449 115 16086 8666 6348 0.0305 166235 0.0277 18.950 30.885 Gata1 MA0035.2 Zinc-coordinating GATA vertebrates 10.878 0.373 414 150 14350 10402 2917 0.0257 75905 0.0232 18.503 31.028 Gfi MA0038.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 9.470 0.391 394 170 13731 11021 2561 0.0205 65844 0.0183 18.435 26.523 NFE2L2 MA0150.1 Zipper-Type Leucine Zipper vertebrates 14.394 0.486 211 353 5635 19117 409 0.0036 8970 0.00274 18.389 32.498 FOXD1 MA0031.1 Winged Helix-Turn-Helix Forkhead vertebrates 11.926 0.275 393 171 13087 11665 2481 0.0159 62921 0.014 18.136 34.987 IRF1 MA0050.1 Winged Helix-Turn-Helix IRF vertebrates 16.008 0.383 228 336 6075 18677 503 0.00483 11517 0.00384 17.936 36.232 SRF MA0083.1 Other Alpha-Helix MADS vertebrates 17.965 0.466 53 511 908 23844 66 0.000634 1019 0.00034 17.828 20.336 Nobox MA0125.1 Helix-Turn-Helix Homeo vertebrates 9.573 0.260 391 173 13558 11194 3001 0.0192 77190 0.0172 17.771 26.960 Sox2 MA0143.1 Other Alpha-Helix High Mobility Group vertebrates 12.951 0.361 118 446 2809 21943 185 0.00222 3844 0.0016 17.309 23.168 Foxa2 MA0047.2 Winged Helix-Turn-Helix Forkhead vertebrates 13.268 0.315 356 208 11656 13096 1697 0.0163 43535 0.0145 16.721 31.200 Tal1::Gata1 MA0140.1 Zipper-Type Helix-Loop-Helix vertebrates 11.297 0.451 221 343 6212 18540 465 0.0067 11200 0.0056 16.471 28.971 TEAD1 MA0090.1 Helix-Turn-Helix Homeo vertebrates 15.678 0.507 199 365 5222 19530 373 0.00358 8446 0.00282 16.185 31.910 MZF1_5-13 MA0057.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 9.400 0.588 415 149 13425 11327 2947 0.0236 77649 0.0216 15.548 46.483 HLF MA0043.1 Zipper-Type Leucine Zipper vertebrates 11.147 0.394 213 351 5508 19244 429 0.00412 9969 0.00332 15.489 36.393 Sox17 MA0078.1 Other Alpha-Helix High Mobility Group vertebrates 10.502 0.384 394 170 13879 10873 2520 0.0182 65883 0.0165 14.788 24.612 STAT1 MA0137.2 Ig-fold Stat vertebrates 13.119 0.452 225 339 6394 18358 454 0.00545 10990 0.00458 14.432 28.502 Sox5 MA0087.1 Other Alpha-Helix High Mobility Group vertebrates 10.831 0.199 379 185 13087 11665 2765 0.0155 72042 0.014 14.122 25.855 ELK1 MA0028.1 Winged Helix-Turn-Helix Ets vertebrates 8.812 0.568 406 158 13642 11110 2093 0.0168 54748 0.0152 14.120 35.855 RUNX1 MA0002.2 Ig-fold Runt vertebrates 10.401 0.502 407 157 13641 11111 2224 0.0196 58648 0.0179 14.007 36.603 Stat3 MA0144.1 Ig-fold Stat vertebrates 13.601 0.505 338 226 9883 14869 947 0.00758 23645 0.00657 14.005 47.484 Nkx3-2 MA0122.1 Helix-Turn-Helix Homeo vertebrates 8.542 0.463 434 130 15425 9327 3414 0.0246 91612 0.0229 12.645 29.602 MZF1_1-4 MA0056.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 8.586 0.725 476 88 16863 7889 7398 0.0355 201000 0.0335 12.620 40.880 HNF1A MA0046.1 Helix-Turn-Helix Homeo vertebrates 15.548 0.259 118 446 3044 21708 192 0.00215 4352 0.00169 12.477 18.541 Foxq1 MA0040.1 Winged Helix-Turn-Helix Forkhead vertebrates 14.070 0.202 259 305 8007 16745 870 0.00766 22088 0.00675 12.439 24.481 FOXF2 MA0030.1 Winged Helix-Turn-Helix Forkhead vertebrates 14.824 0.334 153 411 4097 20655 271 0.00304 6459 0.00251 11.719 21.902 Klf4 MA0039.2 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 12.618 0.771 430 134 13645 11107 3279 0.0263 88731 0.0247 11.535 55.837 Pax4 MA0068.1 Helix-Turn-Helix Homeo vertebrates 11.004 0.441 8 556 112 24640 8 0.000192 113 9.42e-05 11.236 5.203 SP1 MA0079.2 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 11.129 0.820 392 172 12391 12361 2950 0.0236 79797 0.0222 10.994 45.580 NFKB1 MA0105.1 Ig-fold Rel vertebrates 15.627 0.758 158 406 3946 20806 269 0.00237 6372 0.00195 10.681 28.061 Arnt::Ahr MA0006.1 Zipper-Type Helix-Loop-Helix vertebrates 9.532 0.715 398 166 13597 11155 2487 0.0119 66086 0.011 9.961 30.929 IRF2 MA0051.1 Winged Helix-Turn-Helix IRF vertebrates 21.134 0.412 39 525 844 23908 45 0.000649 923 0.000462 9.705 10.026 Tcfcp2l1 MA0145.1 Other CP2 vertebrates 11.650 0.609 323 241 10591 14161 1203 0.0135 32190 0.0125 9.682 25.852 Lhx3 MA0135.1 Helix-Turn-Helix Homeo vertebrates 16.354 0.131 195 369 5806 18946 498 0.00518 12758 0.00461 9.489 19.791 CREB1 MA0018.2 Zipper-Type Leucine Zipper vertebrates 10.139 0.523 299 265 9204 15548 769 0.00493 19712 0.00438 9.203 31.074 TAL1::TCF3 MA0091.1 Zipper-Type Helix-Loop-Helix vertebrates 14.070 0.453 241 323 7491 17261 569 0.00547 14681 0.0049 9.156 21.574 Nr2e3 MA0164.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 12.028 0.373 226 338 6354 18398 492 0.00276 12287 0.00239 8.410 29.816 Myb MA0100.1 Helix-Turn-Helix Myb vertebrates 9.883 0.591 385 179 13518 11234 2159 0.0138 58600 0.013 7.921 23.889 RORA_2 MA0072.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 17.425 0.369 141 423 3571 21181 203 0.00228 5079 0.00198 7.538 23.709 NKX3-1 MA0124.1 Helix-Turn-Helix Homeo vertebrates 11.127 0.179 363 201 12654 12098 2524 0.0141 68823 0.0134 7.396 22.151 ELK4 MA0076.1 Winged Helix-Turn-Helix Ets vertebrates 14.123 0.583 209 355 6034 18718 364 0.00262 9342 0.00234 6.634 24.397 Pou5f1 MA0142.1 Helix-Turn-Helix Homeo vertebrates 14.808 0.308 119 445 3402 21350 203 0.00244 5205 0.00217 6.447 13.360 Pax6 MA0069.1 Helix-Turn-Helix Homeo vertebrates 13.798 0.432 48 516 1218 23534 59 0.000661 1377 0.000536 6.054 8.298 YY1 MA0095.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 8.101 0.510 454 110 17190 7562 5912 0.0284 165054 0.0275 6.051 19.661 EBF1 MA0154.1 Zipper-Type Helix-Loop-Helix vertebrates 11.564 0.648 364 200 11288 13464 1428 0.0114 39149 0.0109 5.990 42.655 TP53 MA0106.1 Zinc-coordinating Loop-Sheet-Helix vertebrates 26.239 0.603 1 563 8 24744 1 1.6e-05 8 4.45e-06 5.919 1.695 EWSR1-FLI1 MA0149.1 Winged Helix-Turn-Helix Ets vertebrates 32.871 0.554 11 553 207 24545 11 0.000159 209 0.000105 5.860 4.599 NR3C1 MA0113.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 14.749 0.432 101 463 2522 22230 124 0.00179 3161 0.00158 5.790 17.341 NHLH1 MA0048.1 Zipper-Type Helix-Loop-Helix vertebrates 14.132 0.674 208 356 5783 18969 373 0.00358 9874 0.00329 5.684 27.853 PBX1 MA0070.1 Helix-Turn-Helix Homeo vertebrates 14.641 0.310 134 430 4107 20645 255 0.00245 6634 0.00221 5.657 11.484 RREB1 MA0073.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 22.278 0.623 59 505 1520 23232 73 0.00117 1839 0.00102 5.131 9.540 NFIL3 MA0025.1 Zipper-Type Leucine Zipper vertebrates 14.139 0.265 220 344 6731 18021 581 0.00512 15828 0.00484 4.498 20.519 PPARG::RXRA MA0065.2 Zinc-coordinating Hormone-nuclear Receptor vertebrates 11.663 0.547 203 361 6067 18685 407 0.00489 11080 0.00462 4.450 20.480 ZNF354C MA0130.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 8.958 0.615 477 87 17566 7186 7347 0.0353 207738 0.0346 4.058 30.566 Ddit3::Cebpa MA0019.1 Zipper-Type Leucine Zipper vertebrates 11.652 0.483 185 379 5576 19176 360 0.00346 9754 0.00325 4.052 17.646 T MA0009.1 Beta-Hairpin-Ribbon T vertebrates 17.863 0.452 74 490 1811 22941 83 0.000731 2114 0.000646 3.717 13.495 RORA_1 MA0071.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 13.190 0.424 271 293 8624 16128 685 0.00549 18895 0.00525 3.625 22.784 GABPA MA0062.2 Winged Helix-Turn-Helix Ets vertebrates 13.335 0.647 306 258 9355 15397 754 0.00664 20927 0.0064 3.428 33.275 TLX1::NFIC MA0119.1 Helix-Turn-Helix::Other Homeo::Nuclear Factor I-CCAAT-binding vertebrates 19.665 0.598 40 524 1066 23686 46 0.000516 1162 0.000452 3.325 6.250 NR1H2::RXRA MA0115.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 27.878 0.445 5 559 99 24653 5 6.81e-05 100 4.72e-05 3.321 2.488 Pax5 MA0014.1 Helix-Turn-Helix Homeo vertebrates 12.432 0.575 50 514 1224 23528 52 0.000833 1364 0.000758 3.019 9.427 Spz1 MA0111.1 Other Other vertebrates 11.907 0.538 215 349 6658 18094 452 0.00398 12530 0.00383 2.733 18.863 E2F1 MA0024.1 Winged Helix-Turn-Helix E2F vertebrates 13.838 0.625 258 306 8113 16639 634 0.00406 17630 0.00392 2.539 22.476 INSM1 MA0155.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 14.862 0.667 258 306 7588 17164 631 0.00606 17685 0.0059 2.422 30.151 PLAG1 MA0163.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 19.352 0.798 66 498 1971 22781 91 0.00102 2462 0.000958 2.240 6.586 Arnt MA0004.1 Zipper-Type Helix-Loop-Helix vertebrates 10.992 0.642 225 339 7052 17700 500 0.0024 13904 0.00232 1.946 18.920 Ar MA0007.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 15.703 0.498 21 543 534 24218 21 0.00037 554 0.000339 1.876 4.299 Egr1 MA0162.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 14.456 0.739 219 345 6364 18388 433 0.00381 12188 0.00373 1.619 25.269 HIF1A::ARNT MA0259.1 Zipper-Type Helix-Loop-Helix vertebrates 9.740 0.657 320 244 10914 13838 1324 0.00848 37662 0.00837 1.338 20.185 NR4A2 MA0160.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 10.165 0.491 390 174 13896 10856 2102 0.0135 60034 0.0133 1.166 22.103 MIZF MA0131.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 13.197 0.610 76 488 2080 22672 90 0.000721 2497 0.000694 1.122 10.032 USF1 MA0093.1 Zipper-Type Helix-Loop-Helix vertebrates 11.290 0.643 302 262 9330 15422 774 0.00434 21993 0.00428 1.032 31.067 MYC::MAX MA0059.1 Zipper-Type Helix-Loop-Helix vertebrates 14.237 0.602 119 445 3436 21316 161 0.00142 4535 0.00139 0.949 12.883 Myf MA0055.1 Zipper-Type Helix-Loop-Helix vertebrates 15.914 0.609 290 274 10157 14595 962 0.00924 27519 0.00918 0.791 14.402 CTCF MA0139.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 17.205 0.645 117 447 3236 21516 140 0.00213 3982 0.0021 0.666 14.739 Esrrb MA0141.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 12.806 0.524 298 266 10167 14585 918 0.00882 26346 0.00878 0.429 17.883 Mycn MA0104.2 Zipper-Type Helix-Loop-Helix vertebrates 11.104 0.699 260 304 8332 16420 660 0.00528 18928 0.00526 0.387 20.698 Myc MA0147.1 Zipper-Type Helix-Loop-Helix vertebrates 11.157 0.686 258 306 8288 16464 644 0.00516 18476 0.00513 0.352 20.218 HNF4A MA0114.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 9.617 0.522 205 359 6389 18363 392 0.00408 11240 0.00406 0.352 17.245 MAX MA0058.1 Zipper-Type Helix-Loop-Helix vertebrates 12.685 0.571 257 307 7993 16759 554 0.00444 15900 0.00442 0.297 23.547 NR2F1 MA0017.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 15.924 0.478 125 439 3735 21017 176 0.00197 5073 0.00197 -0.021 11.876 Evi1 MA0029.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 17.909 0.280 63 501 1931 22821 85 0.000953 2457 0.000956 -0.120 5.752 Zfp423 MA0116.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 17.925 0.679 180 384 5691 19061 350 0.0042 10149 0.00423 -0.458 13.783 REST MA0138.2 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 23.134 0.596 7 557 232 24520 8 0.000135 242 0.000141 -0.667 1.255 PPARG MA0066.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 20.365 0.523 2 562 62 24690 2 3.2e-05 64 3.56e-05 -0.738 0.870 ZEB1 MA0103.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 8.305 0.557 471 93 17454 7298 5909 0.0284 171132 0.0285 -0.953 27.568 HNF1B MA0153.1 Helix-Turn-Helix Homeo vertebrates 16.821 0.222 135 429 4107 20645 233 0.00224 6910 0.0023 -1.529 11.944 ESR1 MA0112.2 Zinc-coordinating Hormone-nuclear Receptor vertebrates 13.563 0.594 11 553 345 24407 11 0.000176 355 0.000197 -1.712 1.751 RXR::RAR_DR5 MA0159.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 16.004 0.535 45 519 1313 23439 48 0.000653 1499 0.000708 -2.314 5.235 Zfx MA0146.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 13.077 0.749 311 253 9872 14880 1114 0.0125 33238 0.0129 -4.372 28.677 RXRA::VDR MA0074.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 20.451 0.527 9 555 453 24299 10 0.00012 475 0.000198 -6.217 0.351 NFYA MA0060.1 Other Alpha-Helix NFY CCAAT-binding vertebrates 12.925 0.523 171 393 5865 18887 298 0.00382 9476 0.00421 -6.821 8.416 ESR2 MA0258.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 13.618 0.546 68 496 2219 22533 77 0.00111 2670 0.00134 -6.916 4.732 znf143 MA0088.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 17.541 0.530 31 533 1301 23451 34 0.000545 1473 0.000819 -10.726 0.851