TF JASPAR ID Class Family Tax Group IC GC Content Target gene hits Target gene non-hits Background gene hits Background gene non-hits Target TFBS hits Target TFBS nucleotide rate Background TFBS hits Background TFBS nucleotide rate Z-score Fisher score FOXA1 MA0148.1 Winged Helix-Turn-Helix Forkhead vertebrates 12.533 0.332 307 148 13355 11397 1786 0.023 63112 0.0193 24.742 19.299 HNF1A MA0046.1 Helix-Turn-Helix Homeo vertebrates 15.548 0.259 113 342 3044 21708 163 0.00267 4352 0.00169 21.925 28.650 HOXA5 MA0158.1 Helix-Turn-Helix Homeo vertebrates 8.759 0.315 360 95 17629 7123 5390 0.0504 205993 0.0458 20.467 9.314 Foxa2 MA0047.2 Winged Helix-Turn-Helix Forkhead vertebrates 13.268 0.315 272 183 11656 13096 1223 0.0172 43535 0.0145 20.435 16.819 Gata1 MA0035.2 Zinc-coordinating GATA vertebrates 10.878 0.373 322 133 14350 10402 2048 0.0263 75905 0.0232 19.286 18.011 FOXO3 MA0157.1 Winged Helix-Turn-Helix Forkhead vertebrates 11.734 0.298 303 152 13611 11141 1917 0.0179 69410 0.0154 18.769 14.771 AP1 MA0099.2 Zipper-Type Leucine Zipper vertebrates 9.193 0.405 356 99 16390 8362 3042 0.0249 113253 0.022 18.075 17.903 STAT1 MA0137.2 Ig-fold Stat vertebrates 13.119 0.452 164 291 6394 18358 336 0.00589 10990 0.00458 17.965 13.605 FOXI1 MA0042.1 Winged Helix-Turn-Helix Forkhead vertebrates 13.183 0.263 266 189 11680 13072 1349 0.0189 49366 0.0165 17.927 13.679 CEBPA MA0102.2 Zipper-Type Leucine Zipper vertebrates 8.712 0.358 299 156 12828 11924 1529 0.0161 55606 0.0139 17.243 20.039 ARID3A MA0151.1 Helix-Turn-Helix Arid vertebrates 9.896 0.062 343 112 16086 8666 4378 0.0307 166235 0.0277 16.892 13.473 Gfi MA0038.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 9.470 0.391 293 162 13731 11021 1774 0.0207 65844 0.0183 16.878 9.454 SRY MA0084.1 Other Alpha-Helix High Mobility Group vertebrates 9.193 0.238 318 137 14714 10038 2681 0.0282 101929 0.0255 15.969 12.716 HNF1B MA0153.1 Helix-Turn-Helix Homeo vertebrates 16.821 0.222 127 328 4107 20645 223 0.00313 6910 0.0023 15.898 20.298 REL MA0101.1 Ig-fold Rel vertebrates 10.515 0.559 239 216 10514 14238 826 0.00966 29250 0.00813 15.756 11.322 TBP MA0108.2 Beta-sheet TATA-binding vertebrates 10.086 0.377 238 217 10389 14363 915 0.016 33775 0.0141 15.463 11.883 SPIB MA0081.1 Winged Helix-Turn-Helix Ets vertebrates 9.060 0.466 366 89 17547 7205 4531 0.0371 175639 0.0342 14.872 12.867 Foxd3 MA0041.1 Winged Helix-Turn-Helix Forkhead vertebrates 12.945 0.223 262 193 11354 13398 1320 0.0185 49535 0.0165 14.535 14.608 HNF4A MA0114.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 9.617 0.522 164 291 6389 18363 331 0.00503 11240 0.00406 14.114 13.655 NFATC2 MA0152.1 Ig-fold Rel vertebrates 9.859 0.346 318 137 15176 9576 2574 0.0211 97757 0.019 13.897 9.264 Nkx2-5 MA0063.1 Helix-Turn-Helix Homeo vertebrates 8.270 0.218 351 104 16973 7779 5039 0.0412 197210 0.0384 13.884 10.187 Nobox MA0125.1 Helix-Turn-Helix Homeo vertebrates 9.573 0.260 295 160 13558 11194 2038 0.0191 77190 0.0172 13.558 11.516 RELA MA0107.1 Ig-fold Rel vertebrates 14.757 0.567 179 276 7171 17581 402 0.0047 13690 0.0038 13.457 13.289 Prrx2 MA0075.1 Helix-Turn-Helix Homeo vertebrates 9.063 0.027 327 128 15063 9689 3237 0.0189 123270 0.0171 12.811 14.158 Hand1::Tcfe2a MA0092.1 Zipper-Type Helix-Loop-Helix vertebrates 10.144 0.507 291 164 13286 11466 1445 0.0169 54768 0.0152 12.666 11.881 Pdx1 MA0132.1 Helix-Turn-Helix Homeo vertebrates 9.040 0.194 334 121 15507 9245 3645 0.0256 140973 0.0235 12.622 13.869 PPARG::RXRA MA0065.2 Zinc-coordinating Hormone-nuclear Receptor vertebrates 11.663 0.547 149 306 6067 18685 316 0.00554 11080 0.00462 12.596 9.823 SRF MA0083.1 Other Alpha-Helix MADS vertebrates 17.965 0.466 35 420 908 23844 42 0.000589 1019 0.00034 12.492 9.879 Stat3 MA0144.1 Ig-fold Stat vertebrates 13.601 0.505 235 220 9883 14869 655 0.00766 23645 0.00657 12.452 14.831 FOXF2 MA0030.1 Winged Helix-Turn-Helix Forkhead vertebrates 14.824 0.334 113 342 4097 20655 194 0.00318 6459 0.00251 12.237 12.140 Sox2 MA0143.1 Other Alpha-Helix High Mobility Group vertebrates 12.951 0.361 83 372 2809 21943 121 0.00212 3844 0.0016 12.010 11.289 FOXD1 MA0031.1 Winged Helix-Turn-Helix Forkhead vertebrates 11.926 0.275 279 176 13087 11665 1655 0.0155 62921 0.014 11.759 8.546 FEV MA0156.1 Winged Helix-Turn-Helix Ets vertebrates 12.121 0.442 331 124 15402 9350 2115 0.0198 81722 0.0182 11.195 13.268 Lhx3 MA0135.1 Helix-Turn-Helix Homeo vertebrates 16.354 0.131 137 318 5806 18946 355 0.0054 12758 0.00461 10.745 7.206 NF-kappaB MA0061.1 Ig-fold Rel vertebrates 13.345 0.621 189 266 8381 16371 516 0.00603 18865 0.00524 10.127 7.745 Sox17 MA0078.1 Other Alpha-Helix High Mobility Group vertebrates 10.502 0.384 294 161 13879 10873 1698 0.0179 65883 0.0165 10.111 8.836 TEAD1 MA0090.1 Helix-Turn-Helix Homeo vertebrates 15.678 0.507 137 318 5222 19530 241 0.00338 8446 0.00282 9.853 12.217 SOX9 MA0077.1 Other Alpha-Helix High Mobility Group vertebrates 9.079 0.358 247 208 11417 13335 1085 0.0114 41403 0.0104 9.711 8.018 INSM1 MA0155.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 14.862 0.667 172 283 7588 17164 477 0.00669 17685 0.0059 9.606 7.178 Sox5 MA0087.1 Other Alpha-Helix High Mobility Group vertebrates 10.831 0.199 279 176 13087 11665 1861 0.0152 72042 0.014 9.586 8.546 Pou5f1 MA0142.1 Helix-Turn-Helix Homeo vertebrates 14.808 0.308 94 361 3402 21350 151 0.00265 5205 0.00217 9.507 10.137 PBX1 MA0070.1 Helix-Turn-Helix Homeo vertebrates 14.641 0.310 105 350 4107 20645 192 0.00269 6634 0.00221 9.474 8.260 Pax6 MA0069.1 Helix-Turn-Helix Homeo vertebrates 13.798 0.432 42 413 1218 23534 47 0.000769 1377 0.000536 9.317 9.159 ELF5 MA0136.1 Winged Helix-Turn-Helix Ets vertebrates 8.693 0.429 339 116 16547 8205 2944 0.031 117435 0.0294 8.827 8.210 TAL1::TCF3 MA0091.1 Zipper-Type Helix-Loop-Helix vertebrates 14.070 0.453 174 281 7491 17261 394 0.00553 14681 0.0049 8.379 8.545 RUNX1 MA0002.2 Ig-fold Runt vertebrates 10.401 0.502 296 159 13641 11111 1487 0.0191 58648 0.0179 8.355 11.313 NFE2L2 MA0150.1 Zipper-Type Leucine Zipper vertebrates 14.394 0.486 142 313 5635 19117 248 0.00319 8970 0.00274 7.913 10.584 Esrrb MA0141.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 12.806 0.524 232 223 10167 14585 683 0.00958 26346 0.00878 7.906 11.120 HLF MA0043.1 Zipper-Type Leucine Zipper vertebrates 11.147 0.394 152 303 5508 19244 269 0.00377 9969 0.00332 7.225 16.934 RORA_1 MA0071.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 13.190 0.424 202 253 8624 16128 497 0.00581 18895 0.00525 7.169 10.874 NFKB1 MA0105.1 Ig-fold Rel vertebrates 15.627 0.758 96 359 3946 20806 178 0.00229 6372 0.00195 7.156 6.015 NR1H2::RXRA MA0115.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 27.878 0.445 5 450 99 24653 5 9.94e-05 100 4.72e-05 6.938 3.209 MEF2A MA0052.1 Other Alpha-Helix MADS vertebrates 15.709 0.179 162 293 7006 17746 412 0.00482 15631 0.00434 6.657 7.644 Tal1::Gata1 MA0140.1 Zipper-Type Helix-Loop-Helix vertebrates 11.297 0.451 149 306 6212 18540 289 0.00608 11200 0.0056 5.948 8.652 NR2F1 MA0017.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 15.924 0.478 101 354 3735 21017 138 0.00226 5073 0.00197 5.937 10.033 Nr2e3 MA0164.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 12.028 0.373 157 298 6354 18398 329 0.00269 12287 0.00239 5.725 10.761 Foxq1 MA0040.1 Winged Helix-Turn-Helix Forkhead vertebrates 14.070 0.202 177 278 8007 16745 564 0.00725 22088 0.00675 5.670 6.189 YY1 MA0095.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 8.101 0.510 342 113 17190 7562 4061 0.0285 165054 0.0275 5.491 5.412 IRF2 MA0051.1 Winged Helix-Turn-Helix IRF vertebrates 21.134 0.412 25 430 844 23908 28 0.000589 923 0.000462 5.470 4.163 Myf MA0055.1 Zipper-Type Helix-Loop-Helix vertebrates 15.914 0.609 232 223 10157 14595 690 0.00968 27519 0.00918 4.896 11.197 IRF1 MA0050.1 Winged Helix-Turn-Helix IRF vertebrates 16.008 0.383 146 309 6075 18677 296 0.00415 11517 0.00384 4.670 8.553 NFIL3 MA0025.1 Zipper-Type Leucine Zipper vertebrates 14.139 0.265 162 293 6731 18021 403 0.00518 15828 0.00484 4.595 9.697 NR4A2 MA0160.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 10.165 0.491 292 163 13896 10856 1486 0.0139 60034 0.0133 4.466 8.007 EBF1 MA0154.1 Zipper-Type Helix-Loop-Helix vertebrates 11.564 0.648 256 199 11288 13464 972 0.0114 39149 0.0109 4.335 12.430 RREB1 MA0073.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 22.278 0.623 40 415 1520 23232 50 0.00117 1839 0.00102 4.245 4.111 SPI1 MA0080.2 Winged Helix-Turn-Helix Ets vertebrates 9.640 0.435 323 132 15792 8960 2347 0.0192 95792 0.0186 3.944 7.145 NHLH1 MA0048.1 Zipper-Type Helix-Loop-Helix vertebrates 14.132 0.674 144 311 5783 18969 252 0.00354 9874 0.00329 3.920 10.141 EWSR1-FLI1 MA0149.1 Winged Helix-Turn-Helix Ets vertebrates 32.871 0.554 7 448 207 24545 7 0.000147 209 0.000105 3.818 2.363 ZNF354C MA0130.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 8.958 0.615 361 94 17566 7186 5035 0.0353 207738 0.0346 3.480 10.235 Ddit3::Cebpa MA0019.1 Zipper-Type Leucine Zipper vertebrates 11.652 0.483 124 331 5576 19176 247 0.00347 9754 0.00325 3.454 4.512 Arnt::Ahr MA0006.1 Zipper-Type Helix-Loop-Helix vertebrates 9.532 0.715 290 165 13597 11155 1624 0.0114 66086 0.011 3.319 9.223 RXRA::VDR MA0074.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 20.451 0.527 13 442 453 24299 14 0.000246 475 0.000198 3.088 2.503 MZF1_5-13 MA0057.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 9.400 0.588 285 170 13425 11327 1883 0.022 77649 0.0216 2.801 8.516 Nkx3-2 MA0122.1 Helix-Turn-Helix Homeo vertebrates 8.542 0.463 315 140 15425 9327 2216 0.0233 91612 0.0229 2.524 6.622 RXR::RAR_DR5 MA0159.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 16.004 0.535 32 423 1313 23439 39 0.000775 1499 0.000708 2.313 2.680 Tcfcp2l1 MA0145.1 Other CP2 vertebrates 11.650 0.609 226 229 10591 14161 782 0.0128 32190 0.0125 2.311 6.217 USF1 MA0093.1 Zipper-Type Helix-Loop-Helix vertebrates 11.290 0.643 191 264 9330 15422 541 0.00443 21993 0.00428 2.119 3.351 Myb MA0100.1 Helix-Turn-Helix Myb vertebrates 9.883 0.591 291 164 13518 11234 1420 0.0133 58600 0.013 2.085 10.158 MZF1_1-4 MA0056.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 8.586 0.725 347 108 16863 7889 4833 0.0339 201000 0.0335 2.026 9.260 CTCF MA0139.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 17.205 0.645 80 375 3236 21516 99 0.0022 3982 0.0021 1.948 5.531 T MA0009.1 Beta-Hairpin-Ribbon T vertebrates 17.863 0.452 46 409 1811 22941 54 0.000695 2114 0.000646 1.739 4.003 MAX MA0058.1 Zipper-Type Helix-Loop-Helix vertebrates 12.685 0.571 165 290 7993 16759 388 0.00454 15900 0.00442 1.645 3.181 Spz1 MA0111.1 Other Other vertebrates 11.907 0.538 151 304 6658 18094 305 0.00392 12530 0.00383 1.383 6.242 E2F1 MA0024.1 Winged Helix-Turn-Helix E2F vertebrates 13.838 0.625 169 286 8113 16639 426 0.00398 17630 0.00392 0.964 3.552 Egr1 MA0162.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 14.456 0.739 146 309 6364 18388 294 0.00378 12188 0.00373 0.841 6.494 REST MA0138.2 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 23.134 0.596 5 450 232 24520 6 0.000147 242 0.000141 0.430 0.853 RORA_2 MA0072.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 17.425 0.369 88 367 3571 21181 121 0.00198 5079 0.00198 0.090 5.921 NKX3-1 MA0124.1 Helix-Turn-Helix Homeo vertebrates 11.127 0.179 271 184 12654 12098 1635 0.0134 68823 0.0134 -0.042 8.488 Klf4 MA0039.2 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 12.618 0.771 287 168 13645 11107 2107 0.0246 88731 0.0247 -0.120 7.831 Pax5 MA0014.1 Helix-Turn-Helix Homeo vertebrates 12.432 0.575 28 427 1224 23528 32 0.000748 1364 0.000758 -0.346 1.941 ELK1 MA0028.1 Winged Helix-Turn-Helix Ets vertebrates 8.812 0.568 281 174 13642 11110 1297 0.0152 54748 0.0152 -0.364 5.941 Evi1 MA0029.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 17.909 0.280 43 412 1931 22821 57 0.000933 2457 0.000956 -0.698 2.163 PLAG1 MA0163.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 19.352 0.798 38 417 1971 22781 57 0.000933 2462 0.000958 -0.756 0.902 ZEB1 MA0103.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 8.305 0.557 356 99 17454 7298 4047 0.0284 171132 0.0285 -0.779 8.855 TLX1::NFIC MA0119.1 Helix-Turn-Helix::Other Homeo::Nuclear Factor I-CCAAT-binding vertebrates 19.665 0.598 24 431 1066 23686 26 0.000426 1162 0.000452 -1.175 1.689 Ar MA0007.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 15.703 0.498 12 443 534 24218 12 0.000309 554 0.000339 -1.536 1.258 CREB1 MA0018.2 Zipper-Type Leucine Zipper vertebrates 10.139 0.523 190 265 9204 15548 455 0.00426 19712 0.00438 -1.770 3.643 PPARG MA0066.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 20.365 0.523 1 454 62 24690 1 2.34e-05 64 3.56e-05 -1.980 0.381 NR3C1 MA0113.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 14.749 0.432 63 392 2522 22230 71 0.00149 3161 0.00158 -2.032 4.756 TP53 MA0106.1 Zinc-coordinating Loop-Sheet-Helix vertebrates 26.239 0.603 0 455 8 24744 0 0 8 4.45e-06 -2.206 0.000 Arnt MA0004.1 Zipper-Type Helix-Loop-Helix vertebrates 10.992 0.642 135 320 7052 17700 312 0.00219 13904 0.00232 -2.497 1.182 Mycn MA0104.2 Zipper-Type Helix-Loop-Helix vertebrates 11.104 0.699 169 286 8332 16420 432 0.00505 18928 0.00526 -2.671 2.706 Myc MA0147.1 Zipper-Type Helix-Loop-Helix vertebrates 11.157 0.686 169 286 8288 16464 421 0.00492 18476 0.00513 -2.743 2.864 MIZF MA0131.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 13.197 0.610 43 412 2080 22672 52 0.000608 2497 0.000694 -3.035 1.449 ELK4 MA0076.1 Winged Helix-Turn-Helix Ets vertebrates 14.123 0.583 123 332 6034 18718 204 0.00215 9342 0.00234 -3.642 2.242 HIF1A::ARNT MA0259.1 Zipper-Type Helix-Loop-Helix vertebrates 9.740 0.657 222 233 10914 13838 856 0.00801 37662 0.00837 -3.711 3.661 MYC::MAX MA0059.1 Zipper-Type Helix-Loop-Helix vertebrates 14.237 0.602 65 390 3436 21316 96 0.00123 4535 0.00139 -3.778 0.860 SP1 MA0079.2 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 11.129 0.820 263 192 12391 12361 1833 0.0214 79797 0.0222 -4.656 7.392 ESR2 MA0258.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 13.618 0.546 41 414 2219 22533 53 0.00112 2670 0.00134 -5.585 0.672 Pax4 MA0068.1 Helix-Turn-Helix Homeo vertebrates 11.004 0.441 1 454 112 24640 1 3.51e-05 113 9.42e-05 -5.689 0.136 Zfx MA0146.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 13.077 0.749 200 255 9872 14880 747 0.0122 33238 0.0129 -5.752 3.119 Zfp423 MA0116.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 17.925 0.679 114 341 5691 19061 216 0.00379 10149 0.00423 -6.303 1.811 znf143 MA0088.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 17.541 0.530 20 435 1301 23451 26 0.000608 1473 0.000819 -6.829 0.197 ESR1 MA0112.2 Zinc-coordinating Hormone-nuclear Receptor vertebrates 13.563 0.594 4 451 345 24407 4 9.35e-05 355 0.000197 -6.870 0.131 GABPA MA0062.2 Winged Helix-Turn-Helix Ets vertebrates 13.335 0.647 192 263 9355 15397 431 0.00554 20927 0.0064 -9.902 3.463 NFYA MA0060.1 Other Alpha-Helix NFY CCAAT-binding vertebrates 12.925 0.523 118 337 5865 18887 177 0.00331 9476 0.00421 -12.882 1.927