TF JASPAR ID Class Family Tax Group IC GC Content Target gene hits Target gene non-hits Background gene hits Background gene non-hits Target TFBS hits Target TFBS nucleotide rate Background TFBS hits Background TFBS nucleotide rate Z-score Fisher score Nkx2-5 MA0063.1 Helix-Turn-Helix Homeo vertebrates 8.270 0.218 375 59 16973 7779 7702 0.0498 197210 0.0384 61.794 39.156 ARID3A MA0151.1 Helix-Turn-Helix Arid vertebrates 9.896 0.062 352 82 16086 8666 6525 0.0361 166235 0.0277 53.385 29.432 HOXA5 MA0158.1 Helix-Turn-Helix Homeo vertebrates 8.759 0.315 376 58 17629 7123 7600 0.0561 205993 0.0458 51.416 31.140 SRY MA0084.1 Other Alpha-Helix High Mobility Group vertebrates 9.193 0.238 334 100 14714 10038 3964 0.0329 101929 0.0255 49.116 31.745 Pdx1 MA0132.1 Helix-Turn-Helix Homeo vertebrates 9.040 0.194 356 78 15507 9245 5447 0.0302 140973 0.0235 45.767 40.825 TBP MA0108.2 Beta-sheet TATA-binding vertebrates 10.086 0.377 266 168 10389 14363 1376 0.0191 33775 0.0141 43.931 34.753 FOXI1 MA0042.1 Winged Helix-Turn-Helix Forkhead vertebrates 13.183 0.263 295 139 11680 13072 1956 0.0217 49366 0.0165 42.563 40.142 Foxd3 MA0041.1 Winged Helix-Turn-Helix Forkhead vertebrates 12.945 0.223 289 145 11354 13398 1937 0.0215 49535 0.0165 40.313 39.755 Prrx2 MA0075.1 Helix-Turn-Helix Homeo vertebrates 9.063 0.027 355 79 15063 9689 4787 0.0221 123270 0.0171 39.829 46.387 Sox5 MA0087.1 Other Alpha-Helix High Mobility Group vertebrates 10.831 0.199 305 129 13087 11665 2849 0.0184 72042 0.014 38.908 29.409 NKX3-1 MA0124.1 Helix-Turn-Helix Homeo vertebrates 11.127 0.179 306 128 12654 12098 2714 0.0175 68823 0.0134 37.566 35.746 Nobox MA0125.1 Helix-Turn-Helix Homeo vertebrates 9.573 0.260 319 115 13558 11194 2895 0.0214 77190 0.0172 33.798 34.369 FOXD1 MA0031.1 Winged Helix-Turn-Helix Forkhead vertebrates 11.926 0.275 329 105 13087 11665 2397 0.0177 62921 0.014 32.897 50.401 FOXO3 MA0157.1 Winged Helix-Turn-Helix Forkhead vertebrates 11.734 0.298 320 114 13611 11141 2610 0.0193 69410 0.0154 32.445 34.495 Foxa2 MA0047.2 Winged Helix-Turn-Helix Forkhead vertebrates 13.268 0.315 290 144 11656 13096 1640 0.0182 43535 0.0145 31.741 36.318 Foxq1 MA0040.1 Winged Helix-Turn-Helix Forkhead vertebrates 14.070 0.202 228 206 8007 16745 899 0.00913 22088 0.00675 30.196 39.555 FOXA1 MA0148.1 Winged Helix-Turn-Helix Forkhead vertebrates 12.533 0.332 325 109 13355 11397 2288 0.0232 63112 0.0193 29.805 42.425 SOX9 MA0077.1 Other Alpha-Helix High Mobility Group vertebrates 9.079 0.358 274 160 11417 13335 1582 0.0131 41403 0.0104 28.655 27.411 CEBPA MA0102.2 Zipper-Type Leucine Zipper vertebrates 8.712 0.358 316 118 12828 11924 2049 0.017 55606 0.0139 27.681 41.907 NFIL3 MA0025.1 Zipper-Type Leucine Zipper vertebrates 14.139 0.265 203 231 6731 18021 654 0.00664 15828 0.00484 27.025 39.714 Gata1 MA0035.2 Zinc-coordinating GATA vertebrates 10.878 0.373 328 106 14350 10402 2610 0.0265 75905 0.0232 22.800 31.483 Pou5f1 MA0142.1 Helix-Turn-Helix Homeo vertebrates 14.808 0.308 99 335 3402 21350 226 0.00313 5205 0.00217 21.454 15.019 Gfi MA0038.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 9.470 0.391 312 122 13731 11021 2274 0.021 65844 0.0183 20.908 26.849 Lhx3 MA0135.1 Helix-Turn-Helix Homeo vertebrates 16.354 0.131 177 257 5806 18946 490 0.00588 12758 0.00461 19.523 33.973 MEF2A MA0052.1 Other Alpha-Helix MADS vertebrates 15.709 0.179 195 239 7006 17746 602 0.00556 15631 0.00434 19.192 29.141 NFATC2 MA0152.1 Ig-fold Rel vertebrates 9.859 0.346 330 104 15176 9576 3330 0.0215 97757 0.019 19.050 23.291 HNF1B MA0153.1 Helix-Turn-Helix Homeo vertebrates 16.821 0.222 128 306 4107 20645 287 0.00318 6910 0.0023 18.978 24.288 FOXF2 MA0030.1 Winged Helix-Turn-Helix Forkhead vertebrates 14.824 0.334 132 302 4097 20655 264 0.00341 6459 0.00251 18.675 27.502 Sox17 MA0078.1 Other Alpha-Helix High Mobility Group vertebrates 10.502 0.384 306 128 13879 10873 2256 0.0187 65883 0.0165 18.509 21.202 IRF1 MA0050.1 Winged Helix-Turn-Helix IRF vertebrates 16.008 0.383 176 258 6075 18677 446 0.00494 11517 0.00384 18.496 28.936 HNF1A MA0046.1 Helix-Turn-Helix Homeo vertebrates 15.548 0.259 107 327 3044 21708 185 0.00239 4352 0.00169 17.649 26.788 HLF MA0043.1 Zipper-Type Leucine Zipper vertebrates 11.147 0.394 159 275 5508 19244 384 0.00425 9969 0.00332 16.791 25.115 Ddit3::Cebpa MA0019.1 Zipper-Type Leucine Zipper vertebrates 11.652 0.483 151 283 5576 19176 364 0.00403 9754 0.00325 14.236 18.975 Nr2e3 MA0164.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 12.028 0.373 167 267 6354 18398 451 0.00291 12287 0.00239 11.159 19.220 SPIB MA0081.1 Winged Helix-Turn-Helix Ets vertebrates 9.060 0.466 369 65 17547 7205 5511 0.0356 175639 0.0342 8.263 25.890 Tal1::Gata1 MA0140.1 Zipper-Type Helix-Loop-Helix vertebrates 11.297 0.451 145 289 6212 18540 369 0.00613 11200 0.0056 7.365 9.491 Pax6 MA0069.1 Helix-Turn-Helix Homeo vertebrates 13.798 0.432 38 396 1218 23534 53 0.000685 1377 0.000536 6.690 7.440 RORA_2 MA0072.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 17.425 0.369 100 334 3571 21181 171 0.00221 5079 0.00198 5.469 13.439 AP1 MA0099.2 Zipper-Type Leucine Zipper vertebrates 9.193 0.405 353 81 16390 8362 3505 0.0226 113253 0.022 4.370 26.572 Evi1 MA0029.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 17.909 0.280 57 377 1931 22821 84 0.00109 2457 0.000956 4.350 9.168 PBX1 MA0070.1 Helix-Turn-Helix Homeo vertebrates 14.641 0.310 112 322 4107 20645 217 0.0024 6634 0.00221 4.230 13.844 IRF2 MA0051.1 Winged Helix-Turn-Helix IRF vertebrates 21.134 0.412 30 404 844 23908 33 0.000548 923 0.000462 4.174 8.114 Sox2 MA0143.1 Other Alpha-Helix High Mobility Group vertebrates 12.951 0.361 78 356 2809 21943 127 0.00176 3844 0.0016 4.050 10.204 RXRA::VDR MA0074.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 20.451 0.527 17 417 453 24299 18 0.000249 475 0.000198 3.755 5.650 STAT1 MA0137.2 Ig-fold Stat vertebrates 13.119 0.452 164 270 6394 18358 348 0.00482 10990 0.00458 3.650 17.034 TLX1::NFIC MA0119.1 Helix-Turn-Helix::Other Homeo::Nuclear Factor I-CCAAT-binding vertebrates 19.665 0.598 37 397 1066 23686 40 0.000517 1162 0.000452 3.152 9.257 EWSR1-FLI1 MA0149.1 Winged Helix-Turn-Helix Ets vertebrates 32.871 0.554 8 426 207 24545 8 0.000133 209 0.000105 2.842 3.397 T MA0009.1 Beta-Hairpin-Ribbon T vertebrates 17.863 0.452 54 380 1811 22941 70 0.000711 2114 0.000646 2.625 8.981 Nkx3-2 MA0122.1 Helix-Turn-Helix Homeo vertebrates 8.542 0.463 335 99 15425 9327 2802 0.0233 91612 0.0229 2.537 24.071 ELF5 MA0136.1 Winged Helix-Turn-Helix Ets vertebrates 8.693 0.429 355 79 16547 8205 3582 0.0298 117435 0.0294 2.381 26.311 TAL1::TCF3 MA0091.1 Zipper-Type Helix-Loop-Helix vertebrates 14.070 0.453 174 260 7491 17261 455 0.00504 14681 0.0049 2.144 11.491 E2F1 MA0024.1 Winged Helix-Turn-Helix E2F vertebrates 13.838 0.625 205 229 8113 16639 548 0.00405 17630 0.00392 2.113 21.580 Hand1::Tcfe2a MA0092.1 Zipper-Type Helix-Loop-Helix vertebrates 10.144 0.507 296 138 13286 11466 1669 0.0154 54768 0.0152 1.579 21.077 SRF MA0083.1 Other Alpha-Helix MADS vertebrates 17.965 0.466 24 410 908 23844 32 0.000354 1019 0.00034 0.801 3.385 NFE2L2 MA0150.1 Zipper-Type Leucine Zipper vertebrates 14.394 0.486 131 303 5635 19117 267 0.00271 8970 0.00274 -0.625 8.314 Ar MA0007.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 15.703 0.498 16 418 534 24218 16 0.000325 554 0.000339 -0.806 3.504 Pax4 MA0068.1 Helix-Turn-Helix Homeo vertebrates 11.004 0.441 3 431 112 24640 3 8.31e-05 113 9.42e-05 -1.243 1.145 RUNX1 MA0002.2 Ig-fold Runt vertebrates 10.401 0.502 291 143 13641 11111 1748 0.0177 58648 0.0179 -1.408 14.927 Arnt MA0004.1 Zipper-Type Helix-Loop-Helix vertebrates 10.992 0.642 165 269 7052 17700 405 0.00224 13904 0.00232 -1.639 11.185 NR3C1 MA0113.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 14.749 0.432 63 371 2522 22230 90 0.0015 3161 0.00158 -2.260 5.787 YY1 MA0095.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 8.101 0.510 350 84 17190 7562 4905 0.0272 165054 0.0275 -2.260 16.005 TP53 MA0106.1 Zinc-coordinating Loop-Sheet-Helix vertebrates 26.239 0.603 0 434 8 24744 0 0 8 4.45e-06 -2.423 0.000 SPI1 MA0080.2 Winged Helix-Turn-Helix Ets vertebrates 9.640 0.435 344 90 15792 8960 2830 0.0183 95792 0.0186 -2.683 26.562 NR2F1 MA0017.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 15.924 0.478 98 336 3735 21017 143 0.00185 5073 0.00197 -2.958 10.481 REL MA0101.1 Ig-fold Rel vertebrates 10.515 0.559 247 187 10514 14238 851 0.00785 29250 0.00813 -3.172 20.351 RREB1 MA0073.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 22.278 0.623 41 393 1520 23232 50 0.000923 1839 0.00102 -3.241 5.316 ESR1 MA0112.2 Zinc-coordinating Hormone-nuclear Receptor vertebrates 13.563 0.594 8 426 345 24407 8 0.000148 355 0.000197 -3.711 1.326 MAX MA0058.1 Zipper-Type Helix-Loop-Helix vertebrates 12.685 0.571 185 249 7993 16759 453 0.00418 15900 0.00442 -3.727 12.195 USF1 MA0093.1 Zipper-Type Helix-Loop-Helix vertebrates 11.290 0.643 206 228 9330 15422 626 0.00404 21993 0.00428 -3.729 10.625 RELA MA0107.1 Ig-fold Rel vertebrates 14.757 0.567 163 271 7171 17581 388 0.00358 13690 0.0038 -3.776 9.397 RORA_1 MA0071.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 13.190 0.424 204 230 8624 16128 540 0.00498 18895 0.00525 -3.841 15.674 NR1H2::RXRA MA0115.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 27.878 0.445 1 433 99 24653 1 1.57e-05 100 4.72e-05 -4.848 0.193 MIZF MA0131.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 13.197 0.610 52 382 2080 22672 61 0.000563 2497 0.000694 -5.190 4.964 Myb MA0100.1 Helix-Turn-Helix Myb vertebrates 9.883 0.591 305 129 13518 11234 1683 0.0124 58600 0.013 -5.508 24.403 Pax5 MA0014.1 Helix-Turn-Helix Homeo vertebrates 12.432 0.575 29 405 1224 23528 33 0.000609 1364 0.000758 -5.647 2.709 TEAD1 MA0090.1 Helix-Turn-Helix Homeo vertebrates 15.678 0.507 122 312 5222 19530 228 0.00253 8446 0.00282 -5.725 7.916 FEV MA0156.1 Winged Helix-Turn-Helix Ets vertebrates 12.121 0.442 343 91 15402 9350 2356 0.0174 81722 0.0182 -6.006 30.478 PPARG MA0066.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 20.365 0.523 0 434 62 24690 0 0 64 3.56e-05 -6.288 0.000 Arnt::Ahr MA0006.1 Zipper-Type Helix-Loop-Helix vertebrates 9.532 0.715 306 128 13597 11155 1875 0.0104 66086 0.011 -6.331 24.203 RXR::RAR_DR5 MA0159.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 16.004 0.535 29 405 1313 23439 34 0.000533 1499 0.000708 -6.851 2.080 NFYA MA0060.1 Other Alpha-Helix NFY CCAAT-binding vertebrates 12.925 0.523 148 286 5865 18887 256 0.00378 9476 0.00421 -6.957 14.038 CTCF MA0139.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 17.205 0.645 81 353 3236 21516 101 0.00177 3982 0.0021 -7.535 7.271 znf143 MA0088.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 17.541 0.530 30 404 1301 23451 33 0.000609 1473 0.000819 -7.639 2.506 Spz1 MA0111.1 Other Other vertebrates 11.907 0.538 157 277 6658 18094 332 0.00337 12530 0.00383 -7.745 10.971 CREB1 MA0018.2 Zipper-Type Leucine Zipper vertebrates 10.139 0.523 213 221 9204 15548 523 0.00386 19712 0.00438 -8.204 14.824 ELK4 MA0076.1 Winged Helix-Turn-Helix Ets vertebrates 14.123 0.583 152 282 6034 18718 232 0.00193 9342 0.00234 -8.830 14.384 REST MA0138.2 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 23.134 0.596 2 432 232 24520 2 3.88e-05 242 0.000141 -9.015 0.090 MYC::MAX MA0059.1 Zipper-Type Helix-Loop-Helix vertebrates 14.237 0.602 74 360 3436 21316 103 0.00105 4535 0.00139 -9.537 3.296 Stat3 MA0144.1 Ig-fold Stat vertebrates 13.601 0.505 233 201 9883 14869 624 0.00576 23645 0.00657 -10.453 18.830 HNF4A MA0114.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 9.617 0.522 153 281 6389 18363 278 0.00334 11240 0.00406 -11.868 11.496 NR4A2 MA0160.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 10.165 0.491 307 127 13896 10856 1624 0.012 60034 0.0133 -12.286 21.657 NHLH1 MA0048.1 Zipper-Type Helix-Loop-Helix vertebrates 14.132 0.674 130 304 5783 18969 232 0.00257 9874 0.00329 -13.143 6.865 NFKB1 MA0105.1 Ig-fold Rel vertebrates 15.627 0.758 82 352 3946 20806 137 0.00139 6372 0.00195 -13.154 2.857 Myc MA0147.1 Zipper-Type Helix-Loop-Helix vertebrates 11.157 0.686 179 255 8288 16464 454 0.00419 18476 0.00513 -13.750 7.615 NF-kappaB MA0061.1 Ig-fold Rel vertebrates 13.345 0.621 195 239 8381 16371 464 0.00428 18865 0.00524 -13.836 13.471 Egr1 MA0162.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 14.456 0.739 157 277 6364 18388 284 0.00288 12188 0.00373 -14.393 13.641 HIF1A::ARNT MA0259.1 Zipper-Type Helix-Loop-Helix vertebrates 9.740 0.657 261 173 10914 13838 963 0.00711 37662 0.00837 -14.416 24.595 PLAG1 MA0163.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 19.352 0.798 36 398 1971 22781 41 0.00053 2462 0.000958 -14.417 0.854 Mycn MA0104.2 Zipper-Type Helix-Loop-Helix vertebrates 11.104 0.699 182 252 8332 16420 452 0.00417 18928 0.00526 -15.658 8.398 ELK1 MA0028.1 Winged Helix-Turn-Helix Ets vertebrates 8.812 0.568 302 132 13642 11110 1438 0.0133 54748 0.0152 -16.505 21.138 Esrrb MA0141.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 12.806 0.524 222 212 10167 14585 652 0.00722 26346 0.00878 -17.445 10.987 PPARG::RXRA MA0065.2 Zinc-coordinating Hormone-nuclear Receptor vertebrates 11.663 0.547 134 300 6067 18685 250 0.00346 11080 0.00462 -17.770 6.382 ESR2 MA0258.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 13.618 0.546 36 398 2219 22533 40 0.000665 2670 0.00134 -19.135 0.342 MZF1_5-13 MA0057.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 9.400 0.588 295 139 13425 11327 2031 0.0187 77649 0.0216 -20.281 19.088 Zfp423 MA0116.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 17.925 0.679 116 318 5691 19061 213 0.00295 10149 0.00423 -20.556 3.228 Myf MA0055.1 Zipper-Type Helix-Loop-Helix vertebrates 15.914 0.609 218 216 10157 14595 652 0.00722 27519 0.00918 -21.343 9.460 ZEB1 MA0103.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 8.305 0.557 360 74 17454 7298 4526 0.0251 171132 0.0285 -21.679 19.969 GABPA MA0062.2 Winged Helix-Turn-Helix Ets vertebrates 13.335 0.647 203 231 9355 15397 458 0.00465 20927 0.0064 -22.809 9.257 INSM1 MA0155.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 14.862 0.667 166 268 7588 17164 377 0.00418 17685 0.0059 -23.408 7.591 EBF1 MA0154.1 Zipper-Type Helix-Loop-Helix vertebrates 11.564 0.648 246 188 11288 13464 914 0.00844 39149 0.0109 -24.512 12.753 Zfx MA0146.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 13.077 0.749 244 190 9872 14880 755 0.00976 33238 0.0129 -29.250 25.634 ZNF354C MA0130.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 8.958 0.615 364 70 17566 7186 5276 0.0292 207738 0.0346 -30.836 21.689 Tcfcp2l1 MA0145.1 Other CP2 vertebrates 11.650 0.609 235 199 10591 14161 706 0.00912 32190 0.0125 -31.827 13.367 MZF1_1-4 MA0056.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 8.586 0.725 354 80 16863 7889 5049 0.028 201000 0.0335 -32.104 21.973 SP1 MA0079.2 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 11.129 0.820 274 160 12391 12361 1873 0.0173 79797 0.0222 -34.541 17.118 Klf4 MA0039.2 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 12.618 0.771 304 130 13645 11107 1965 0.0181 88731 0.0247 -43.761 22.372