TF JASPAR ID Class Family Tax Group IC GC Content Target gene hits Target gene non-hits Background gene hits Background gene non-hits Target TFBS hits Target TFBS nucleotide rate Background TFBS hits Background TFBS nucleotide rate Z-score Fisher score HOXA5 MA0158.1 Helix-Turn-Helix Homeo vertebrates 8.759 0.315 53 10 17629 7123 1419 0.0647 205993 0.0458 37.888 4.309 SRY MA0084.1 Other Alpha-Helix High Mobility Group vertebrates 9.193 0.238 49 14 14714 10038 770 0.0395 101929 0.0255 37.220 6.363 Nkx2-5 MA0063.1 Helix-Turn-Helix Homeo vertebrates 8.270 0.218 57 6 16973 7779 1387 0.0553 197210 0.0384 37.022 10.155 Foxd3 MA0041.1 Winged Helix-Turn-Helix Forkhead vertebrates 12.945 0.223 42 21 11354 13398 393 0.0269 49535 0.0165 34.046 7.244 FOXI1 MA0042.1 Winged Helix-Turn-Helix Forkhead vertebrates 13.183 0.263 43 20 11680 13072 378 0.0259 49366 0.0165 30.911 7.414 ARID3A MA0151.1 Helix-Turn-Helix Arid vertebrates 9.896 0.062 54 9 16086 8666 1151 0.0394 166235 0.0277 29.711 8.473 Pdx1 MA0132.1 Helix-Turn-Helix Homeo vertebrates 9.040 0.194 53 10 15507 9245 999 0.0342 140973 0.0235 29.466 8.690 FOXO3 MA0157.1 Winged Helix-Turn-Helix Forkhead vertebrates 11.734 0.298 48 15 13611 11141 522 0.0238 69410 0.0154 28.442 7.785 Sox5 MA0087.1 Other Alpha-Helix High Mobility Group vertebrates 10.831 0.199 48 15 13087 11665 548 0.0219 72042 0.014 27.967 9.019 Foxa2 MA0047.2 Winged Helix-Turn-Helix Forkhead vertebrates 13.268 0.315 50 13 11656 13096 326 0.0223 43535 0.0145 27.237 15.666 Prrx2 MA0075.1 Helix-Turn-Helix Homeo vertebrates 9.063 0.027 49 14 15063 9689 897 0.0256 123270 0.0171 27.227 5.675 Nobox MA0125.1 Helix-Turn-Helix Homeo vertebrates 9.573 0.260 51 12 13558 11194 561 0.0256 77190 0.0172 27.152 11.271 FOXA1 MA0148.1 Winged Helix-Turn-Helix Forkhead vertebrates 12.533 0.332 51 12 13355 11397 437 0.0274 63112 0.0193 24.681 11.835 SOX9 MA0077.1 Other Alpha-Helix High Mobility Group vertebrates 9.079 0.358 42 21 11417 13335 316 0.0162 41403 0.0104 24.218 7.105 Sox17 MA0078.1 Other Alpha-Helix High Mobility Group vertebrates 10.502 0.384 47 16 13879 10873 460 0.0236 65883 0.0165 23.419 6.288 FOXD1 MA0031.1 Winged Helix-Turn-Helix Forkhead vertebrates 11.926 0.275 48 15 13087 11665 448 0.0204 62921 0.014 22.961 9.019 Gfi MA0038.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 9.470 0.391 47 16 13731 11021 447 0.0255 65844 0.0183 22.435 6.590 TBP MA0108.2 Beta-sheet TATA-binding vertebrates 10.086 0.377 38 25 10389 14363 238 0.0203 33775 0.0141 22.283 5.962 CEBPA MA0102.2 Zipper-Type Leucine Zipper vertebrates 8.712 0.358 47 16 12828 11924 392 0.0201 55606 0.0139 22.175 8.603 NKX3-1 MA0124.1 Helix-Turn-Helix Homeo vertebrates 11.127 0.179 46 17 12654 12098 486 0.0194 68823 0.0134 21.871 8.014 Foxq1 MA0040.1 Winged Helix-Turn-Helix Forkhead vertebrates 14.070 0.202 35 28 8007 16745 175 0.011 22088 0.00675 21.573 8.992 Gata1 MA0035.2 Zinc-coordinating GATA vertebrates 10.878 0.373 48 15 14350 10402 489 0.0307 75905 0.0232 20.742 6.211 NFATC2 MA0152.1 Ig-fold Rel vertebrates 9.859 0.346 52 11 15176 9576 644 0.0257 97757 0.019 20.476 8.345 AP1 MA0099.2 Zipper-Type Leucine Zipper vertebrates 9.193 0.405 53 10 16390 8362 722 0.0288 113253 0.022 19.332 6.695 NFIL3 MA0025.1 Zipper-Type Leucine Zipper vertebrates 14.139 0.265 34 29 6731 18021 125 0.00784 15828 0.00484 18.087 11.916 SPIB MA0081.1 Winged Helix-Turn-Helix Ets vertebrates 9.060 0.466 55 8 17547 7205 1042 0.0416 175639 0.0342 17.080 6.311 Sox2 MA0143.1 Other Alpha-Helix High Mobility Group vertebrates 12.951 0.361 20 43 2809 21943 37 0.00316 3844 0.0016 16.319 11.228 HLF MA0043.1 Zipper-Type Leucine Zipper vertebrates 11.147 0.394 31 32 5508 19244 80 0.00547 9969 0.00332 15.607 12.915 MEF2A MA0052.1 Other Alpha-Helix MADS vertebrates 15.709 0.179 31 32 7006 17746 119 0.00678 15631 0.00434 15.518 7.916 Lhx3 MA0135.1 Helix-Turn-Helix Homeo vertebrates 16.354 0.131 31 32 5806 18946 95 0.00704 12758 0.00461 15.013 11.758 ELF5 MA0136.1 Winged Helix-Turn-Helix Ets vertebrates 8.693 0.429 53 10 16547 8205 681 0.0349 117435 0.0294 13.798 6.366 Pou5f1 MA0142.1 Helix-Turn-Helix Homeo vertebrates 14.808 0.308 22 41 3402 21350 43 0.00368 5205 0.00217 13.539 10.860 HNF1B MA0153.1 Helix-Turn-Helix Homeo vertebrates 16.821 0.222 27 36 4107 20645 55 0.00376 6910 0.0023 12.710 13.966 FEV MA0156.1 Winged Helix-Turn-Helix Ets vertebrates 12.121 0.442 49 14 15402 9350 485 0.0221 81722 0.0182 12.374 5.046 FOXF2 MA0030.1 Winged Helix-Turn-Helix Forkhead vertebrates 14.824 0.334 24 39 4097 20655 50 0.00399 6459 0.00251 12.334 10.244 YY1 MA0095.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 8.101 0.510 51 12 17190 7562 926 0.0317 165054 0.0275 10.616 3.546 IRF1 MA0050.1 Winged Helix-Turn-Helix IRF vertebrates 16.008 0.383 26 37 6075 18677 78 0.00533 11517 0.00384 10.102 5.954 HNF1A MA0046.1 Helix-Turn-Helix Homeo vertebrates 15.548 0.259 20 43 3044 21708 33 0.00263 4352 0.00169 9.551 10.057 TAL1::TCF3 MA0091.1 Zipper-Type Helix-Loop-Helix vertebrates 14.070 0.453 26 37 7491 17261 94 0.00643 14681 0.0049 9.188 3.177 NR1H2::RXRA MA0115.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 27.878 0.445 2 61 99 24653 2 0.000194 100 4.72e-05 8.758 3.602 STAT1 MA0137.2 Ig-fold Stat vertebrates 13.119 0.452 30 33 6394 18358 70 0.00598 10990 0.00458 8.691 8.705 Hand1::Tcfe2a MA0092.1 Zipper-Type Helix-Loop-Helix vertebrates 10.144 0.507 46 17 13286 11466 309 0.0176 54768 0.0152 8.180 6.629 SPI1 MA0080.2 Winged Helix-Turn-Helix Ets vertebrates 9.640 0.435 50 13 15792 8960 533 0.0213 95792 0.0186 8.147 5.144 RUNX1 MA0002.2 Ig-fold Runt vertebrates 10.401 0.502 50 13 13641 11111 326 0.0204 58648 0.0179 7.923 9.846 T MA0009.1 Beta-Hairpin-Ribbon T vertebrates 17.863 0.452 12 51 1811 22941 17 0.00107 2114 0.000646 6.871 6.268 Nkx3-2 MA0122.1 Helix-Turn-Helix Homeo vertebrates 8.542 0.463 52 11 15425 9327 492 0.0252 91612 0.0229 6.508 7.771 NFE2L2 MA0150.1 Zipper-Type Leucine Zipper vertebrates 14.394 0.486 25 38 5635 19117 56 0.00351 8970 0.00274 6.139 6.228 Nr2e3 MA0164.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 12.028 0.373 25 38 6354 18398 77 0.00307 12287 0.00239 5.827 4.569 RELA MA0107.1 Ig-fold Rel vertebrates 14.757 0.567 32 31 7171 17581 81 0.00462 13690 0.0038 5.510 8.406 NR2F1 MA0017.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 15.924 0.478 22 41 3735 21017 32 0.00255 5073 0.00197 5.447 9.413 Ddit3::Cebpa MA0019.1 Zipper-Type Leucine Zipper vertebrates 11.652 0.483 25 38 5576 19176 58 0.00397 9754 0.00325 5.236 6.382 REL MA0101.1 Ig-fold Rel vertebrates 10.515 0.559 41 22 10514 14238 161 0.00918 29250 0.00813 4.879 8.282 TEAD1 MA0090.1 Helix-Turn-Helix Homeo vertebrates 15.678 0.507 26 37 5222 19530 50 0.00342 8446 0.00282 4.748 8.347 Pax6 MA0069.1 Helix-Turn-Helix Homeo vertebrates 13.798 0.432 9 54 1218 23534 10 0.000798 1377 0.000536 4.696 5.610 PBX1 MA0070.1 Helix-Turn-Helix Homeo vertebrates 14.641 0.310 16 47 4107 20645 40 0.00274 6634 0.00221 4.644 3.005 Stat3 MA0144.1 Ig-fold Stat vertebrates 13.601 0.505 38 25 9883 14869 129 0.00735 23645 0.00657 4.041 7.050 EWSR1-FLI1 MA0149.1 Winged Helix-Turn-Helix Ets vertebrates 32.871 0.554 2 61 207 24545 2 0.000205 209 0.000105 4.007 2.315 HNF4A MA0114.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 9.617 0.522 28 35 6389 18363 62 0.00459 11240 0.00406 3.496 6.854 CREB1 MA0018.2 Zipper-Type Leucine Zipper vertebrates 10.139 0.523 34 29 9204 15548 108 0.00492 19712 0.00438 3.423 5.308 Pax4 MA0068.1 Helix-Turn-Helix Homeo vertebrates 11.004 0.441 1 62 112 24640 1 0.000171 113 9.42e-05 3.191 1.386 SRF MA0083.1 Other Alpha-Helix MADS vertebrates 17.965 0.466 7 56 908 23844 7 0.000479 1019 0.00034 3.094 4.788 IRF2 MA0051.1 Winged Helix-Turn-Helix IRF vertebrates 21.134 0.412 6 57 844 23908 6 0.000616 923 0.000462 2.945 3.882 RXR::RAR_DR5 MA0159.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 16.004 0.535 7 56 1313 23439 9 0.000872 1499 0.000708 2.537 3.011 Tal1::Gata1 MA0140.1 Zipper-Type Helix-Loop-Helix vertebrates 11.297 0.451 23 40 6212 18540 59 0.00605 11200 0.0056 2.516 3.521 RORA_2 MA0072.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 17.425 0.369 19 44 3571 21181 27 0.00215 5079 0.00198 1.658 6.827 RORA_1 MA0071.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 13.190 0.424 37 26 8624 16128 96 0.00547 18895 0.00525 1.266 9.273 Esrrb MA0141.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 12.806 0.524 35 28 10167 14585 132 0.00903 26346 0.00878 1.079 4.243 ELK4 MA0076.1 Winged Helix-Turn-Helix Ets vertebrates 14.123 0.583 23 40 6034 18718 48 0.00246 9342 0.00234 1.068 3.844 NF-kappaB MA0061.1 Ig-fold Rel vertebrates 13.345 0.621 35 28 8381 16371 95 0.00541 18865 0.00524 0.985 7.992 Ar MA0007.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 15.703 0.498 3 60 534 24218 3 0.000376 554 0.000339 0.789 1.859 NHLH1 MA0048.1 Zipper-Type Helix-Loop-Helix vertebrates 14.132 0.674 28 35 5783 18969 49 0.00335 9874 0.00329 0.410 8.579 PPARG::RXRA MA0065.2 Zinc-coordinating Hormone-nuclear Receptor vertebrates 11.663 0.547 24 39 6067 18685 54 0.00462 11080 0.00462 -0.027 4.454 Myb MA0100.1 Helix-Turn-Helix Myb vertebrates 9.883 0.591 44 19 13518 11234 283 0.0129 58600 0.013 -0.463 4.613 REST MA0138.2 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 23.134 0.596 1 62 232 24520 1 0.00012 242 0.000141 -0.859 0.802 Arnt::Ahr MA0006.1 Zipper-Type Helix-Loop-Helix vertebrates 9.532 0.715 41 22 13597 11155 316 0.0108 66086 0.011 -0.860 2.701 RXRA::VDR MA0074.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 20.451 0.527 2 61 453 24299 2 0.000171 475 0.000198 -0.888 1.134 E2F1 MA0024.1 Winged Helix-Turn-Helix E2F vertebrates 13.838 0.625 33 30 8113 16639 82 0.00374 17630 0.00392 -1.227 6.879 ESR2 MA0258.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 13.618 0.546 10 53 2219 22533 12 0.00123 2670 0.00134 -1.229 2.931 TP53 MA0106.1 Zinc-coordinating Loop-Sheet-Helix vertebrates 26.239 0.603 0 63 8 24744 0 0 8 4.45e-06 -1.449 0.000 NR4A2 MA0160.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 10.165 0.491 48 15 13896 10856 284 0.0129 60034 0.0133 -1.455 7.156 USF1 MA0093.1 Zipper-Type Helix-Loop-Helix vertebrates 11.290 0.643 34 29 9330 15422 101 0.00403 21993 0.00428 -1.611 5.064 ELK1 MA0028.1 Winged Helix-Turn-Helix Ets vertebrates 8.812 0.568 43 20 13642 11110 258 0.0147 54748 0.0152 -1.748 3.755 CTCF MA0139.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 17.205 0.645 14 49 3236 21516 17 0.00184 3982 0.0021 -2.416 3.469 Myf MA0055.1 Zipper-Type Helix-Loop-Helix vertebrates 15.914 0.609 37 26 10157 14595 126 0.00862 27519 0.00918 -2.465 5.658 EBF1 MA0154.1 Zipper-Type Helix-Loop-Helix vertebrates 11.564 0.648 44 19 11288 13464 180 0.0103 39149 0.0109 -2.511 9.326 PPARG MA0066.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 20.365 0.523 0 63 62 24690 0 0 64 3.56e-05 -2.698 0.000 Pax5 MA0014.1 Helix-Turn-Helix Homeo vertebrates 12.432 0.575 5 58 1224 23528 5 0.00057 1364 0.000758 -2.906 1.604 NFKB1 MA0105.1 Ig-fold Rel vertebrates 15.627 0.758 17 46 3946 20806 26 0.00163 6372 0.00195 -3.044 4.029 Evi1 MA0029.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 17.909 0.280 8 55 1931 22821 9 0.000718 2457 0.000956 -3.260 2.150 NR3C1 MA0113.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 14.749 0.432 11 52 2522 22230 12 0.00123 3161 0.00158 -3.719 2.944 TLX1::NFIC MA0119.1 Helix-Turn-Helix::Other Homeo::Nuclear Factor I-CCAAT-binding vertebrates 19.665 0.598 3 60 1066 23686 3 0.000239 1162 0.000452 -4.247 0.666 PLAG1 MA0163.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 19.352 0.798 5 58 1971 22781 8 0.000638 2462 0.000958 -4.364 0.562 RREB1 MA0073.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 22.278 0.623 5 58 1520 23232 6 0.000684 1839 0.00102 -4.469 1.064 Zfp423 MA0116.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 17.925 0.679 18 45 5691 19061 41 0.00351 10149 0.00423 -4.697 1.702 MIZF MA0131.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 13.197 0.610 7 56 2080 22672 7 0.000399 2497 0.000694 -4.736 1.282 Tcfcp2l1 MA0145.1 Other CP2 vertebrates 11.650 0.609 37 26 10591 14161 141 0.0113 32190 0.0125 -4.800 4.838 MAX MA0058.1 Zipper-Type Helix-Loop-Helix vertebrates 12.685 0.571 31 32 7993 16759 64 0.00365 15900 0.00442 -4.883 5.541 INSM1 MA0155.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 14.862 0.667 31 32 7588 17164 72 0.00492 17685 0.0059 -5.336 6.442 Spz1 MA0111.1 Other Other vertebrates 11.907 0.538 23 40 6658 18094 48 0.00301 12530 0.00383 -5.583 2.802 ZEB1 MA0103.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 8.305 0.557 54 9 17454 7298 768 0.0263 171132 0.0285 -5.712 5.504 MYC::MAX MA0059.1 Zipper-Type Helix-Loop-Helix vertebrates 14.237 0.602 9 54 3436 21316 14 0.000878 4535 0.00139 -5.756 0.658 ESR1 MA0112.2 Zinc-coordinating Hormone-nuclear Receptor vertebrates 13.563 0.594 0 63 345 24407 0 0 355 0.000197 -5.969 0.000 NFYA MA0060.1 Other Alpha-Helix NFY CCAAT-binding vertebrates 12.925 0.523 19 44 5865 18887 36 0.00328 9476 0.00421 -6.033 1.926 ZNF354C MA0130.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 8.958 0.615 53 10 17566 7186 935 0.032 207738 0.0346 -6.099 4.419 GABPA MA0062.2 Winged Helix-Turn-Helix Ets vertebrates 13.335 0.647 34 29 9355 15397 83 0.0052 20927 0.0064 -6.282 5.017 Arnt MA0004.1 Zipper-Type Helix-Loop-Helix vertebrates 10.992 0.642 26 37 7052 17700 45 0.00154 13904 0.00232 -6.812 3.904 znf143 MA0088.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 17.541 0.530 3 60 1301 23451 3 0.000342 1473 0.000819 -7.022 0.431 MZF1_5-13 MA0057.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 9.400 0.588 48 15 13425 11327 335 0.0191 77649 0.0216 -7.165 8.212 Mycn MA0104.2 Zipper-Type Helix-Loop-Helix vertebrates 11.104 0.699 28 35 8332 16420 68 0.00388 18928 0.00526 -8.030 3.015 Myc MA0147.1 Zipper-Type Helix-Loop-Helix vertebrates 11.157 0.686 29 34 8288 16464 66 0.00376 18476 0.00513 -8.059 3.645 Egr1 MA0162.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 14.456 0.739 24 39 6364 18388 40 0.00251 12188 0.00373 -8.391 3.876 HIF1A::ARNT MA0259.1 Zipper-Type Helix-Loop-Helix vertebrates 9.740 0.657 39 24 10914 13838 132 0.00602 37662 0.00837 -10.832 5.688 MZF1_1-4 MA0056.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 8.586 0.725 52 11 16863 7889 833 0.0285 201000 0.0335 -11.701 4.846 Klf4 MA0039.2 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 12.618 0.771 46 17 13645 11107 326 0.0186 88731 0.0247 -16.417 5.907 SP1 MA0079.2 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 11.129 0.820 44 19 12391 12361 286 0.0163 79797 0.0222 -16.713 6.755 Zfx MA0146.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 13.077 0.749 28 35 9872 14880 94 0.0075 33238 0.0129 -20.141 1.311