TF JASPAR ID Class Family Tax Group IC GC Content Target gene hits Target gene non-hits Background gene hits Background gene non-hits Target TFBS hits Target TFBS nucleotide rate Background TFBS hits Background TFBS nucleotide rate Z-score Fisher score HOXA5 MA0158.1 Helix-Turn-Helix Homeo vertebrates 8.759 0.315 234 26 17629 7123 3754 0.0544 205993 0.0458 30.614 29.222 Nkx2-5 MA0063.1 Helix-Turn-Helix Homeo vertebrates 8.270 0.218 217 43 16973 7779 3649 0.0463 197210 0.0384 30.611 17.054 SRY MA0084.1 Other Alpha-Helix High Mobility Group vertebrates 9.193 0.238 212 48 14714 10038 1923 0.0314 101929 0.0255 27.630 31.302 SRF MA0083.1 Other Alpha-Helix MADS vertebrates 17.965 0.466 37 223 908 23844 47 0.00102 1019 0.00034 27.455 26.218 FOXI1 MA0042.1 Winged Helix-Turn-Helix Forkhead vertebrates 13.183 0.263 187 73 11680 13072 960 0.0209 49366 0.0165 25.737 34.834 ARID3A MA0151.1 Helix-Turn-Helix Arid vertebrates 9.896 0.062 222 38 16086 8666 3071 0.0334 166235 0.0277 25.636 29.435 Pdx1 MA0132.1 Helix-Turn-Helix Homeo vertebrates 9.040 0.194 215 45 15507 9245 2627 0.0286 140973 0.0235 24.766 27.134 CEBPA MA0102.2 Zipper-Type Leucine Zipper vertebrates 8.712 0.358 199 61 12828 11924 1088 0.0177 55606 0.0139 24.313 35.817 FOXA1 MA0148.1 Winged Helix-Turn-Helix Forkhead vertebrates 12.533 0.332 189 71 13355 11397 1185 0.0236 63112 0.0193 23.348 21.375 TBP MA0108.2 Beta-sheet TATA-binding vertebrates 10.086 0.377 173 87 10389 14363 652 0.0177 33775 0.0141 22.948 33.983 Foxa2 MA0047.2 Winged Helix-Turn-Helix Forkhead vertebrates 13.268 0.315 178 82 11656 13096 832 0.0181 43535 0.0145 22.172 26.347 Nobox MA0125.1 Helix-Turn-Helix Homeo vertebrates 9.573 0.260 201 59 13558 11194 1434 0.0208 77190 0.0172 20.725 30.686 Sox5 MA0087.1 Other Alpha-Helix High Mobility Group vertebrates 10.831 0.199 196 64 13087 11665 1359 0.0172 72042 0.014 20.352 30.090 Gfi MA0038.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 9.470 0.391 200 60 13731 11021 1209 0.0219 65844 0.0183 19.985 28.065 SOX9 MA0077.1 Other Alpha-Helix High Mobility Group vertebrates 9.079 0.358 172 88 11417 13335 801 0.0131 41403 0.0104 19.851 23.287 Foxd3 MA0041.1 Winged Helix-Turn-Helix Forkhead vertebrates 12.945 0.223 184 76 11354 13398 915 0.0199 49535 0.0165 19.663 35.100 FOXO3 MA0157.1 Winged Helix-Turn-Helix Forkhead vertebrates 11.734 0.298 201 59 13611 11141 1288 0.0187 69410 0.0154 19.507 30.182 Prrx2 MA0075.1 Helix-Turn-Helix Homeo vertebrates 9.063 0.027 204 56 15063 9689 2263 0.0205 123270 0.0171 19.302 20.472 FOXD1 MA0031.1 Winged Helix-Turn-Helix Forkhead vertebrates 11.926 0.275 189 71 13087 11665 1171 0.017 62921 0.014 18.871 23.565 NFATC2 MA0152.1 Ig-fold Rel vertebrates 9.859 0.346 209 51 15176 9576 1770 0.0224 97757 0.019 18.659 24.056 AP1 MA0099.2 Zipper-Type Leucine Zipper vertebrates 9.193 0.405 220 40 16390 8362 2026 0.0257 113253 0.022 18.538 24.520 SPIB MA0081.1 Winged Helix-Turn-Helix Ets vertebrates 9.060 0.466 233 27 17547 7205 3042 0.0386 175639 0.0342 18.044 28.739 Foxq1 MA0040.1 Winged Helix-Turn-Helix Forkhead vertebrates 14.070 0.202 136 124 8007 16745 438 0.00873 22088 0.00675 17.927 24.202 ELF5 MA0136.1 Winged Helix-Turn-Helix Ets vertebrates 8.693 0.429 224 36 16547 8205 2035 0.0332 117435 0.0294 16.765 27.418 FOXF2 MA0030.1 Winged Helix-Turn-Helix Forkhead vertebrates 14.824 0.334 88 172 4097 20655 143 0.00363 6459 0.00251 16.521 25.176 HLF MA0043.1 Zipper-Type Leucine Zipper vertebrates 11.147 0.394 112 148 5508 19244 210 0.00457 9969 0.00332 16.008 30.024 Sox17 MA0078.1 Other Alpha-Helix High Mobility Group vertebrates 10.502 0.384 204 56 13879 10873 1177 0.0192 65883 0.0165 15.834 30.736 FEV MA0156.1 Winged Helix-Turn-Helix Ets vertebrates 12.121 0.442 217 43 15402 9350 1448 0.021 81722 0.0182 15.677 30.262 TEAD1 MA0090.1 Helix-Turn-Helix Homeo vertebrates 15.678 0.507 106 154 5222 19530 177 0.00385 8446 0.00282 14.449 27.856 IRF1 MA0050.1 Winged Helix-Turn-Helix IRF vertebrates 16.008 0.383 110 150 6075 18677 230 0.005 11517 0.00384 13.920 21.820 MEF2A MA0052.1 Other Alpha-Helix MADS vertebrates 15.709 0.179 132 128 7006 17746 305 0.00553 15631 0.00434 13.343 31.198 NFIL3 MA0025.1 Zipper-Type Leucine Zipper vertebrates 14.139 0.265 107 153 6731 18021 303 0.00604 15828 0.00484 12.840 13.880 NKX3-1 MA0124.1 Helix-Turn-Helix Homeo vertebrates 11.127 0.179 180 80 12654 12098 1204 0.0153 68823 0.0134 12.157 19.691 Gata1 MA0035.2 Zinc-coordinating GATA vertebrates 10.878 0.373 201 59 14350 10402 1282 0.0255 75905 0.0232 11.574 23.598 Hand1::Tcfe2a MA0092.1 Zipper-Type Helix-Loop-Helix vertebrates 10.144 0.507 203 57 13286 11466 945 0.0171 54768 0.0152 11.532 35.529 Lhx3 MA0135.1 Helix-Turn-Helix Homeo vertebrates 16.354 0.131 98 162 5806 18946 237 0.00558 12758 0.00461 10.662 15.282 CTCF MA0139.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 17.205 0.645 64 196 3236 21516 80 0.00275 3982 0.0021 10.550 14.676 HNF1B MA0153.1 Helix-Turn-Helix Homeo vertebrates 16.821 0.222 81 179 4107 20645 135 0.00293 6910 0.0023 9.759 18.841 NFE2L2 MA0150.1 Zipper-Type Leucine Zipper vertebrates 14.394 0.486 101 159 5635 19117 172 0.00343 8970 0.00274 9.731 19.022 Ddit3::Cebpa MA0019.1 Zipper-Type Leucine Zipper vertebrates 11.652 0.483 106 154 5576 19176 182 0.00396 9754 0.00325 9.176 23.722 Sox2 MA0143.1 Other Alpha-Helix High Mobility Group vertebrates 12.951 0.361 55 205 2809 21943 77 0.00209 3844 0.0016 9.089 12.273 SPI1 MA0080.2 Winged Helix-Turn-Helix Ets vertebrates 9.640 0.435 223 37 15792 8960 1599 0.0203 95792 0.0186 9.031 33.464 PBX1 MA0070.1 Helix-Turn-Helix Homeo vertebrates 14.641 0.310 76 184 4107 20645 128 0.00278 6634 0.00221 9.008 14.920 Myb MA0100.1 Helix-Turn-Helix Myb vertebrates 9.883 0.591 200 60 13518 11234 990 0.0143 58600 0.013 8.651 30.043 ELK1 MA0028.1 Winged Helix-Turn-Helix Ets vertebrates 8.812 0.568 205 55 13642 11110 918 0.0166 54748 0.0152 8.599 34.132 RELA MA0107.1 Ig-fold Rel vertebrates 14.757 0.567 120 140 7171 17581 249 0.00451 13690 0.0038 8.519 19.284 Nkx3-2 MA0122.1 Helix-Turn-Helix Homeo vertebrates 8.542 0.463 207 53 15425 9327 1508 0.0246 91612 0.0229 8.319 20.222 Tal1::Gata1 MA0140.1 Zipper-Type Helix-Loop-Helix vertebrates 11.297 0.451 102 158 6212 18540 195 0.00636 11200 0.0056 7.525 14.653 STAT1 MA0137.2 Ig-fold Stat vertebrates 13.119 0.452 108 152 6394 18358 193 0.00524 10990 0.00458 7.294 17.289 RORA_2 MA0072.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 17.425 0.369 65 195 3571 21181 95 0.00241 5079 0.00198 7.239 12.080 EWSR1-FLI1 MA0149.1 Winged Helix-Turn-Helix Ets vertebrates 32.871 0.554 6 254 207 24545 6 0.000196 209 0.000105 6.556 3.716 TAL1::TCF3 MA0091.1 Zipper-Type Helix-Loop-Helix vertebrates 14.070 0.453 117 143 7491 17261 253 0.0055 14681 0.0049 6.427 14.596 Pou5f1 MA0142.1 Helix-Turn-Helix Homeo vertebrates 14.808 0.308 67 193 3402 21350 93 0.00253 5205 0.00217 5.697 15.248 Ar MA0007.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 15.703 0.498 12 248 534 24218 12 0.000478 554 0.000339 5.600 4.398 Pax6 MA0069.1 Helix-Turn-Helix Homeo vertebrates 13.798 0.432 26 234 1218 23534 28 0.00071 1377 0.000536 5.573 7.432 REL MA0101.1 Ig-fold Rel vertebrates 10.515 0.559 164 96 10514 14238 485 0.00879 29250 0.00813 5.441 24.461 Arnt::Ahr MA0006.1 Zipper-Type Helix-Loop-Helix vertebrates 9.532 0.715 189 71 13597 11155 1083 0.0118 66086 0.011 5.358 19.493 Nr2e3 MA0164.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 12.028 0.373 106 154 6354 18398 216 0.00274 12287 0.00239 5.299 16.214 RORA_1 MA0071.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 13.190 0.424 133 127 8624 16128 318 0.00576 18895 0.00525 5.239 16.631 Pax4 MA0068.1 Helix-Turn-Helix Homeo vertebrates 11.004 0.441 3 257 112 24640 3 0.000163 113 9.42e-05 5.201 2.135 NR2F1 MA0017.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 15.924 0.478 59 201 3735 21017 90 0.00228 5073 0.00197 5.160 7.115 YY1 MA0095.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 8.101 0.510 233 27 17190 7562 2634 0.0286 165054 0.0275 5.047 32.218 RUNX1 MA0002.2 Ig-fold Runt vertebrates 10.401 0.502 198 62 13641 11111 938 0.0187 58648 0.0179 4.283 26.943 RXRA::VDR MA0074.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 20.451 0.527 10 250 453 24299 10 0.000272 475 0.000198 3.847 3.743 GABPA MA0062.2 Winged Helix-Turn-Helix Ets vertebrates 13.335 0.647 155 105 9355 15397 340 0.00678 20927 0.0064 3.522 27.471 NR3C1 MA0113.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 14.749 0.432 47 213 2522 22230 54 0.00176 3161 0.00158 3.346 9.334 CREB1 MA0018.2 Zipper-Type Leucine Zipper vertebrates 10.139 0.523 148 112 9204 15548 321 0.00465 19712 0.00438 3.030 22.958 ESR1 MA0112.2 Zinc-coordinating Hormone-nuclear Receptor vertebrates 13.563 0.594 7 253 345 24407 7 0.000254 355 0.000197 2.932 2.580 ELK4 MA0076.1 Winged Helix-Turn-Helix Ets vertebrates 14.123 0.583 97 163 6034 18718 155 0.00253 9342 0.00234 2.924 12.808 NFYA MA0060.1 Other Alpha-Helix NFY CCAAT-binding vertebrates 12.925 0.523 90 170 5865 18887 154 0.00446 9476 0.00421 2.866 9.878 PPARG::RXRA MA0065.2 Zinc-coordinating Hormone-nuclear Receptor vertebrates 11.663 0.547 96 164 6067 18685 179 0.00486 11080 0.00462 2.685 11.951 Arnt MA0004.1 Zipper-Type Helix-Loop-Helix vertebrates 10.992 0.642 111 149 7052 17700 229 0.00249 13904 0.00232 2.628 14.025 Myf MA0055.1 Zipper-Type Helix-Loop-Helix vertebrates 15.914 0.609 154 106 10157 14595 437 0.0095 27519 0.00918 2.517 19.570 E2F1 MA0024.1 Winged Helix-Turn-Helix E2F vertebrates 13.838 0.625 121 139 8113 16639 285 0.00413 17630 0.00392 2.502 12.671 NHLH1 MA0048.1 Zipper-Type Helix-Loop-Helix vertebrates 14.132 0.674 98 162 5783 18969 160 0.00348 9874 0.00329 2.398 15.477 HNF1A MA0046.1 Helix-Turn-Helix Homeo vertebrates 15.548 0.259 50 210 3044 21708 72 0.00183 4352 0.00169 2.388 6.939 Stat3 MA0144.1 Ig-fold Stat vertebrates 13.601 0.505 152 108 9883 14869 377 0.00683 23645 0.00657 2.377 20.284 T MA0009.1 Beta-Hairpin-Ribbon T vertebrates 17.863 0.452 27 233 1811 22941 36 0.000717 2114 0.000646 2.056 3.128 Egr1 MA0162.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 14.456 0.739 99 161 6364 18388 195 0.00389 12188 0.00373 1.946 11.634 ZEB1 MA0103.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 8.305 0.557 228 32 17454 7298 2662 0.0289 171132 0.0285 1.795 23.743 Tcfcp2l1 MA0145.1 Other CP2 vertebrates 11.650 0.609 164 96 10591 14161 504 0.0128 32190 0.0125 1.731 23.783 NR1H2::RXRA MA0115.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 27.878 0.445 2 258 99 24653 2 6.16e-05 100 4.72e-05 1.454 1.263 NF-kappaB MA0061.1 Ig-fold Rel vertebrates 13.345 0.621 131 129 8381 16371 296 0.00536 18865 0.00524 1.228 17.139 HIF1A::ARNT MA0259.1 Zipper-Type Helix-Loop-Helix vertebrates 9.740 0.657 165 95 10914 13838 585 0.00848 37662 0.00837 0.858 21.844 PLAG1 MA0163.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 19.352 0.798 30 230 1971 22781 39 0.000989 2462 0.000958 0.731 3.598 HNF4A MA0114.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 9.617 0.522 93 167 6389 18363 173 0.00407 11240 0.00406 0.153 8.236 ESR2 MA0258.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 13.618 0.546 36 224 2219 22533 41 0.00134 2670 0.00134 0.012 5.042 PPARG MA0066.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 20.365 0.523 1 259 62 24690 1 3.62e-05 64 3.56e-05 -0.030 0.728 RREB1 MA0073.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 22.278 0.623 27 233 1520 23232 28 0.00101 1839 0.00102 -0.196 5.127 NR4A2 MA0160.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 10.165 0.491 198 62 13896 10856 917 0.0133 60034 0.0133 -0.366 24.711 MZF1_5-13 MA0057.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 9.400 0.588 187 73 13425 11327 1187 0.0215 77649 0.0216 -0.377 19.235 USF1 MA0093.1 Zipper-Type Helix-Loop-Helix vertebrates 11.290 0.643 144 116 9330 15422 334 0.00424 21993 0.00428 -0.493 18.836 EBF1 MA0154.1 Zipper-Type Helix-Loop-Helix vertebrates 11.564 0.648 167 93 11288 13464 596 0.0108 39149 0.0109 -0.589 20.367 Myc MA0147.1 Zipper-Type Helix-Loop-Helix vertebrates 11.157 0.686 126 134 8288 16464 279 0.00505 18476 0.00513 -0.837 14.522 INSM1 MA0155.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 14.862 0.667 116 144 7588 17164 267 0.0058 17685 0.0059 -0.908 13.266 Esrrb MA0141.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 12.806 0.524 158 102 10167 14585 395 0.00859 26346 0.00878 -1.584 22.569 REST MA0138.2 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 23.134 0.596 3 257 232 24520 3 0.000114 242 0.000141 -1.750 0.815 MAX MA0058.1 Zipper-Type Helix-Loop-Helix vertebrates 12.685 0.571 116 144 7993 16759 235 0.00426 15900 0.00442 -1.813 10.612 TP53 MA0106.1 Zinc-coordinating Loop-Sheet-Helix vertebrates 26.239 0.603 0 260 8 24744 0 0 8 4.45e-06 -1.886 0.000 IRF2 MA0051.1 Winged Helix-Turn-Helix IRF vertebrates 21.134 0.412 11 249 844 23908 12 0.000391 923 0.000462 -2.465 1.281 TLX1::NFIC MA0119.1 Helix-Turn-Helix::Other Homeo::Nuclear Factor I-CCAAT-binding vertebrates 19.665 0.598 15 245 1066 23686 15 0.00038 1162 0.000452 -2.535 1.846 ZNF354C MA0130.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 8.958 0.615 224 36 17566 7186 3127 0.034 207738 0.0346 -2.627 18.781 Klf4 MA0039.2 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 12.618 0.771 198 62 13645 11107 1325 0.024 88731 0.0247 -3.129 26.907 Spz1 MA0111.1 Other Other vertebrates 11.907 0.538 96 164 6658 18094 179 0.00357 12530 0.00383 -3.173 8.181 MIZF MA0131.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 13.197 0.610 27 233 2080 22672 32 0.00058 2497 0.000694 -3.246 1.890 RXR::RAR_DR5 MA0159.1 Zinc-coordinating Hormone-nuclear Receptor vertebrates 16.004 0.535 14 246 1313 23439 19 0.000585 1499 0.000708 -3.460 0.661 Evi1 MA0029.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 17.909 0.280 26 234 1931 22821 32 0.000812 2457 0.000956 -3.490 2.139 Zfp423 MA0116.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 17.925 0.679 79 181 5691 19061 144 0.00391 10149 0.00423 -3.641 5.569 MYC::MAX MA0059.1 Zipper-Type Helix-Loop-Helix vertebrates 14.237 0.602 50 210 3436 21316 60 0.0012 4535 0.00139 -3.823 4.543 Pax5 MA0014.1 Helix-Turn-Helix Homeo vertebrates 12.432 0.575 13 247 1224 23528 17 0.000616 1364 0.000758 -3.860 0.646 NFKB1 MA0105.1 Ig-fold Rel vertebrates 15.627 0.758 57 203 3946 20806 86 0.00171 6372 0.00195 -3.957 4.927 znf143 MA0088.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 17.541 0.530 15 245 1301 23451 18 0.000652 1473 0.000819 -4.347 0.930 Mycn MA0104.2 Zipper-Type Helix-Loop-Helix vertebrates 11.104 0.699 129 131 8332 16420 264 0.00478 18928 0.00526 -4.908 16.154 SP1 MA0079.2 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 11.129 0.820 189 71 12391 12361 1163 0.0211 79797 0.0222 -5.578 29.786 MZF1_1-4 MA0056.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 8.586 0.725 225 35 16863 7889 2944 0.032 201000 0.0335 -6.243 25.672 Zfx MA0146.1 Zinc-coordinating BetaBetaAlpha-zinc finger vertebrates 13.077 0.749 150 110 9872 14880 467 0.0118 33238 0.0129 -7.149 18.892